Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G402300.1 | Wheat | endoplasmic reticulum | 77.71 | 93.85 |
| TraesCS2D01G399600.1 | Wheat | plasma membrane | 91.72 | 91.72 |
| TraesCS2B01G420500.1 | Wheat | plasma membrane | 91.72 | 91.72 |
| Os02t0673600-01 | Rice | cytosol, golgi, plasma membrane | 91.72 | 91.72 |
| EES11276 | Sorghum | cytosol, golgi, plasma membrane | 89.17 | 89.17 |
| TraesCS4A01G211000.1 | Wheat | cytosol, golgi, plasma membrane | 61.78 | 86.61 |
| KRH47879 | Soybean | mitochondrion | 85.99 | 85.99 |
| Solyc01g096130.2.1 | Tomato | cytosol, golgi, plasma membrane | 84.71 | 85.26 |
| TraesCS3D01G052200.1 | Wheat | cytosol, extracellular, golgi | 60.51 | 84.82 |
| KRH06440 | Soybean | cytosol, golgi, plasma membrane | 84.71 | 84.71 |
| VIT_15s0046g00140.t01 | Wine grape | cytosol, golgi, plasma membrane | 84.08 | 84.08 |
| PGSC0003DMT400000662 | Potato | cytosol, golgi, plasma membrane | 83.44 | 83.97 |
| TraesCS7D01G189300.1 | Wheat | cytosol, extracellular, golgi | 49.68 | 83.87 |
| PGSC0003DMT400031602 | Potato | cytosol, golgi, plasma membrane | 83.44 | 83.44 |
| Solyc08g082920.2.1 | Tomato | cytosol, golgi, plasma membrane | 83.44 | 83.44 |
| KRH06313 | Soybean | cytosol, golgi, mitochondrion, plasma membrane | 82.8 | 82.8 |
| VIT_02s0025g02260.t01 | Wine grape | cytosol, golgi, plasma membrane | 82.17 | 82.17 |
| CDX67521 | Canola | cytosol, golgi, plasma membrane | 79.62 | 81.17 |
| Bra028519.1-P | Field mustard | cytosol, golgi, plasma membrane | 79.62 | 81.17 |
| AT5G42000.1 | Thale cress | plasma membrane | 78.98 | 80.52 |
| CDY13373 | Canola | cytosol, golgi, plasma membrane | 78.98 | 80.52 |
| CDY61368 | Canola | cytosol, golgi, plasma membrane | 78.34 | 79.87 |
| Bra027719.1-P | Field mustard | cytosol, golgi, plasma membrane | 78.34 | 79.87 |
| PGSC0003DMT400012896 | Potato | cytosol, golgi, plasma membrane | 79.62 | 79.62 |
| CDY65660 | Canola | endoplasmic reticulum, golgi, plasma membrane | 78.34 | 79.35 |
| Os07t0452500-02 | Rice | plasma membrane | 82.17 | 78.66 |
| HORVU2Hr1G095360.2 | Barley | plastid | 91.72 | 58.78 |
| TraesCS6D01G104100.1 | Wheat | mitochondrion | 41.4 | 35.91 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4336696 | EMBL:AK064998 | ProteinID:BAF15501.1 | ProteinID:BAS90543.1 | ProteinID:CAD41291.2 |
| ProteinID:EAZ31669.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0035339 | GO:GO:0090156 | GO:GO:1900060 |
| InterPro:ORMDL | EnsemblPlantsGene:Os04g0567700 | EnsemblPlants:Os04t0567700-01 | PFAM:PF04061 | PIRSF:PIRSF018147 | PANTHER:PTHR12665 |
| PANTHER:PTHR12665:SF14 | UniProt:Q7XUI3 | TMHMM:TMhelix | UniParc:UPI00001B1005 | RefSeq:XP_015637165.1 | SEG:seg |
Description
ORMDL family protein. (Os04t0567700-01)
Coordinates
chr4:+:28521890..28525648
Molecular Weight (calculated)
18322.6 Da
IEP (calculated)
9.807
GRAVY (calculated)
0.280
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKLYVQAVQ PADLNKNTEW FMYPGVWTTY ILILFFSWLL VLSVFGCTPG MAWTFVNLAH FAMTYHFFHW KKGTPFADDQ GMYNRLTWWE QMDNGKQLTR
101: NRKFLTVVPL VLYLIALHTT DYQHPMLFLN TIAVVVLVVA KLPNMHKVRI FGINAGN
101: NRKFLTVVPL VLYLIALHTT DYQHPMLFLN TIAVVVLVVA KLPNMHKVRI FGINAGN
001: MANLYVKAVP PPDMNRNTEW FMYPGVWTTY MLILFFGWLV VLSVSGCSPG MAWTVVNLAH FVVTYHSFHW MKGTPFADDQ GIYNGLTWWE QMDNGQQLTR
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
101: NRKFLTLVPV VLYLIASHTT DYRHPWLFLN TLAVMVLVVA KFPNMHKVRI FGINGDK
Arabidopsis Description
ORMDL family protein [Source:UniProtKB/TrEMBL;Acc:Q9C5I0]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
SUBAcon: [endoplasmic reticulum,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.