Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G122240.1 | Barley | cytosol | 19.01 | 57.02 |
| HORVU2Hr1G000570.1 | Barley | extracellular, plasma membrane | 30.58 | 41.73 |
| HORVU6Hr1G022540.2 | Barley | extracellular, plasma membrane | 31.96 | 40.85 |
| HORVU2Hr1G000910.1 | Barley | cytosol | 10.47 | 40.43 |
| HORVU2Hr1G000610.1 | Barley | extracellular, mitochondrion | 41.87 | 32.97 |
| HORVU2Hr1G000620.1 | Barley | extracellular, nucleus, plasma membrane | 36.91 | 26.43 |
| HORVU2Hr1G106920.10 | Barley | cytosol, extracellular | 92.84 | 22.72 |
| HORVU2Hr1G106890.4 | Barley | plastid | 76.58 | 17.67 |
| HORVU2Hr1G000760.1 | Barley | cytosol | 17.36 | 16.45 |
| HORVU1Hr1G020240.1 | Barley | cytosol | 42.98 | 14.17 |
| HORVU1Hr1G021390.3 | Barley | endoplasmic reticulum, plasma membrane | 46.56 | 10.91 |
| HORVU5Hr1G116990.7 | Barley | plastid | 43.8 | 10.13 |
| HORVU7Hr1G122200.3 | Barley | cytosol, peroxisome, plastid | 40.5 | 9.66 |
| HORVU2Hr1G000510.18 | Barley | nucleus, plastid | 42.15 | 9.57 |
| HORVU3Hr1G006430.1 | Barley | cytosol | 24.24 | 8.8 |
| HORVU2Hr1G000900.3 | Barley | cytosol | 30.85 | 8.11 |
| HORVU4Hr1G000280.3 | Barley | plasma membrane | 34.99 | 8.1 |
| HORVU2Hr1G019120.1 | Barley | cytosol | 21.76 | 7.36 |
| HORVU5Hr1G125550.1 | Barley | cytosol | 27.0 | 6.97 |
| HORVU0Hr1G014510.3 | Barley | cytosol, extracellular | 26.45 | 6.87 |
| HORVU1Hr1G083100.15 | Barley | mitochondrion | 26.72 | 6.78 |
| HORVU2Hr1G103460.1 | Barley | nucleus | 27.0 | 6.78 |
| HORVU6Hr1G093470.1 | Barley | cytosol, nucleus | 26.17 | 6.56 |
| HORVU3Hr1G098150.6 | Barley | endoplasmic reticulum | 24.79 | 6.29 |
| HORVU1Hr1G090330.1 | Barley | cytosol, extracellular | 22.59 | 5.97 |
| HORVU5Hr1G122660.4 | Barley | cytosol, nucleus | 27.27 | 5.84 |
| HORVU6Hr1G093460.12 | Barley | cytosol, nucleus | 16.53 | 5.83 |
| OQU78685 | Sorghum | cytosol | 13.77 | 5.52 |
| HORVU7Hr1G121470.7 | Barley | cytosol, nucleus | 14.6 | 4.12 |
| HORVU7Hr1G002350.1 | Barley | cytosol, extracellular | 15.43 | 4.07 |
| HORVU2Hr1G000560.16 | Barley | mitochondrion | 13.22 | 3.86 |
| HORVU2Hr1G000700.1 | Barley | cytosol | 12.12 | 3.64 |
| HORVU2Hr1G000770.16 | Barley | mitochondrion | 9.37 | 2.7 |
| HORVU2Hr1G107010.1 | Barley | cytosol | 0.55 | 2.0 |
| HORVU1Hr1G037640.1 | Barley | cytosol | 0.55 | 0.94 |
| HORVU2Hr1G106940.2 | Barley | cytosol, extracellular | 1.1 | 0.42 |
| HORVU5Hr1G117020.5 | Barley | cytosol | 0.0 | 0.0 |
| HORVU6Hr1G093490.2 | Barley | nucleus | 0.0 | 0.0 |
| HORVU6Hr1G095000.5 | Barley | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G107000.2 | EnsemblPlantsGene:HORVU2Hr1G107000 | ncoils:Coil | PANTHER:PTHR44634 | PANTHER:PTHR44634:SF1 | SEG:seg |
| SUPFAM:SSF52058 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:711016260..711017565
Molecular Weight (calculated)
39252.9 Da
IEP (calculated)
4.727
GRAVY (calculated)
-0.088
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: SLCPSXXXXX XXXXHPIESI EIRASSSCGK ELTQFLSHLP KLSKLEVHSC INVTQLAVGV DLQQTTAPTV SSSTSLDVIT MDDTQVKDEQ QEIAEVEKEE
101: ANTVDDDGLL LLPAHLSNSL QELAIDSGNL VVHSLNALKA LTRLELKDCS FRHPFPSCLL DLELSSVEGV LTLSNLTSLT RLEIYRCGED FRCEGLLPLL
201: TRGHLSSLEV IGSPNFFGGW EWDPNAMWGR SSKLQKVETD DIQGFLGAPA LCSLLSSSLS DLHFSWNDET AHFTNEQEEA FQCLTSLQVL YFWFCHKLEH
301: LPAALNKLTN LKRLVICGCP ALRSLPKDGL PSSLRELDVE DCVNKELTEH CRRLMGTIPK IRL
101: ANTVDDDGLL LLPAHLSNSL QELAIDSGNL VVHSLNALKA LTRLELKDCS FRHPFPSCLL DLELSSVEGV LTLSNLTSLT RLEIYRCGED FRCEGLLPLL
201: TRGHLSSLEV IGSPNFFGGW EWDPNAMWGR SSKLQKVETD DIQGFLGAPA LCSLLSSSLS DLHFSWNDET AHFTNEQEEA FQCLTSLQVL YFWFCHKLEH
301: LPAALNKLTN LKRLVICGCP ALRSLPKDGL PSSLRELDVE DCVNKELTEH CRRLMGTIPK IRL
001: MDSSFLLETV AAATGFFTLL GTILFMVYRK FKDHRENKEN DSSSSTQPSP SPPLSSLSLT RKYDVFPSFR GEDVRKDFLS HIQKEFQRQG ITPFVDNNIK
101: RGESIGPELI RAIRGSKIAI ILLSKNYASS SWCLDELVEI IKCKEEMGQT VIVIFYKVDP SLVKKLTGDF GKVFRNTCKG KERENIERWR EAFKKVATIA
201: GYDSRKWDNE SGMIEKIVSD ISEMLNHSTP SRDFDDLIGM GDHMEKMKPL LDIDSDEMKT IGIWGPPGVG KTTIARSLYN QHSDKFQLSV FMESIKTAYT
301: IPACSDDYYE KLQLQQRFLS QITNQENVQI PHLGVAQERL NDKKVLVVID DVNQSVQVDA LAKENDWLGP GSRIIITTQD RGILRAHGIE HIYEVDYPNY
401: EEALQIFCMH AFGQKSPYDG FEELAQQVTT LSGRLPLGLK VMGSYFRGMT KQEWTMALPR VRTHLDGKIE SILKLSYDAL CDVDKSLFLH LACSFHNDDT
501: ELVEQQLGKK FSDLRQGLHV LAEKSLIHMD LRLIRMHVLL AQLGREIVRK QSIHEPGQRQ FLVDATDIRE VLTDDTGSRS VIGIDFDFNT MEKELDISEK
601: AFRGMSNLQF IRIYGDLFSR HGVYYFGGRG HRVSLDYDSK LHFPRGLDYL PGKLSKLEKL WEGIQPLRNL EWLDLTCSRN LKELPDLSTA TNLQRLSIER
701: CSSLVKLPSS IGEATNLKKI NLRECLSLVE LPSSFGNLTN LQELDLRECS SLVELPTSFG NLANVESLEF YECSSLVKLP STFGNLTNLR VLGLRECSSM
801: VELPSSFGNL TNLQVLNLRK CSTLVELPSS FVNLTNLENL DLRDCSSLLP SSFGNVTYLK RLKFYKC
101: RGESIGPELI RAIRGSKIAI ILLSKNYASS SWCLDELVEI IKCKEEMGQT VIVIFYKVDP SLVKKLTGDF GKVFRNTCKG KERENIERWR EAFKKVATIA
201: GYDSRKWDNE SGMIEKIVSD ISEMLNHSTP SRDFDDLIGM GDHMEKMKPL LDIDSDEMKT IGIWGPPGVG KTTIARSLYN QHSDKFQLSV FMESIKTAYT
301: IPACSDDYYE KLQLQQRFLS QITNQENVQI PHLGVAQERL NDKKVLVVID DVNQSVQVDA LAKENDWLGP GSRIIITTQD RGILRAHGIE HIYEVDYPNY
401: EEALQIFCMH AFGQKSPYDG FEELAQQVTT LSGRLPLGLK VMGSYFRGMT KQEWTMALPR VRTHLDGKIE SILKLSYDAL CDVDKSLFLH LACSFHNDDT
501: ELVEQQLGKK FSDLRQGLHV LAEKSLIHMD LRLIRMHVLL AQLGREIVRK QSIHEPGQRQ FLVDATDIRE VLTDDTGSRS VIGIDFDFNT MEKELDISEK
601: AFRGMSNLQF IRIYGDLFSR HGVYYFGGRG HRVSLDYDSK LHFPRGLDYL PGKLSKLEKL WEGIQPLRNL EWLDLTCSRN LKELPDLSTA TNLQRLSIER
701: CSSLVKLPSS IGEATNLKKI NLRECLSLVE LPSSFGNLTN LQELDLRECS SLVELPTSFG NLANVESLEF YECSSLVKLP STFGNLTNLR VLGLRECSSM
801: VELPSSFGNL TNLQVLNLRK CSTLVELPSS FVNLTNLENL DLRDCSSLLP SSFGNVTYLK RLKFYKC
Arabidopsis Description
Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:Q9M8X8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.