Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G457400.1 | Wheat | cytosol | 78.16 | 82.23 |
| TraesCS6A01G411300.1 | Wheat | cytosol | 50.87 | 82.13 |
| TraesCS6D01G394300.1 | Wheat | cytosol | 36.89 | 81.72 |
| HORVU6Hr1G093490.2 | Barley | nucleus | 40.0 | 49.4 |
| HORVU6Hr1G093470.1 | Barley | cytosol, nucleus | 54.37 | 38.67 |
| HORVU3Hr1G098150.6 | Barley | endoplasmic reticulum | 52.62 | 37.9 |
| HORVU7Hr1G122240.1 | Barley | cytosol | 4.17 | 35.54 |
| HORVU2Hr1G000910.1 | Barley | cytosol | 2.91 | 31.91 |
| HORVU2Hr1G103460.1 | Barley | nucleus | 42.43 | 30.22 |
| KXG22476 | Sorghum | cytosol, plasma membrane, plastid | 40.78 | 29.45 |
| HORVU6Hr1G095000.5 | Barley | mitochondrion | 26.41 | 28.66 |
| OQU78392 | Sorghum | cytosol | 26.7 | 28.44 |
| HORVU5Hr1G122660.4 | Barley | cytosol, nucleus | 46.41 | 28.2 |
| KXG22480 | Sorghum | cytosol | 36.41 | 26.1 |
| HORVU2Hr1G107010.1 | Barley | cytosol | 2.52 | 26.0 |
| HORVU5Hr1G117020.5 | Barley | cytosol | 17.48 | 25.07 |
| KXG22479 | Sorghum | cytosol, endoplasmic reticulum, nucleus | 16.6 | 24.85 |
| HORVU2Hr1G106940.2 | Barley | cytosol, extracellular | 21.75 | 23.75 |
| HORVU2Hr1G000570.1 | Barley | extracellular, plasma membrane | 5.73 | 22.18 |
| HORVU2Hr1G019120.1 | Barley | cytosol | 21.84 | 20.97 |
| HORVU0Hr1G014510.3 | Barley | cytosol, extracellular | 27.77 | 20.47 |
| HORVU6Hr1G022540.2 | Barley | extracellular, plasma membrane | 5.63 | 20.42 |
| HORVU5Hr1G125550.1 | Barley | cytosol | 27.57 | 20.2 |
| Os04t0623066-01 | Rice | extracellular, vacuole | 9.81 | 20.08 |
| HORVU1Hr1G090330.1 | Barley | cytosol, extracellular | 26.41 | 19.8 |
| HORVU7Hr1G121470.7 | Barley | cytosol, nucleus | 24.56 | 19.66 |
| HORVU2Hr1G106920.10 | Barley | cytosol, extracellular | 28.16 | 19.55 |
| HORVU2Hr1G106890.4 | Barley | plastid | 28.84 | 18.88 |
| HORVU1Hr1G021390.3 | Barley | endoplasmic reticulum, plasma membrane | 28.35 | 18.85 |
| HORVU1Hr1G083100.15 | Barley | mitochondrion | 26.12 | 18.81 |
| HORVU7Hr1G122200.3 | Barley | cytosol, peroxisome, plastid | 27.57 | 18.66 |
| HORVU7Hr1G002350.1 | Barley | cytosol, extracellular | 24.85 | 18.59 |
| HORVU4Hr1G000280.3 | Barley | plasma membrane | 28.16 | 18.49 |
| HORVU3Hr1G006430.1 | Barley | cytosol | 17.67 | 18.2 |
| HORVU2Hr1G000560.16 | Barley | mitochondrion | 21.55 | 17.87 |
| HORVU2Hr1G000700.1 | Barley | cytosol | 20.97 | 17.85 |
| HORVU2Hr1G000510.18 | Barley | nucleus, plastid | 27.28 | 17.57 |
| HORVU2Hr1G000770.16 | Barley | mitochondrion | 21.26 | 17.41 |
| HORVU2Hr1G000900.3 | Barley | cytosol | 23.3 | 17.38 |
| HORVU5Hr1G116990.7 | Barley | plastid | 26.31 | 17.27 |
| HORVU1Hr1G020240.1 | Barley | cytosol | 18.25 | 17.08 |
| HORVU2Hr1G107000.2 | Barley | cytosol, plastid | 5.83 | 16.53 |
| HORVU2Hr1G000610.1 | Barley | extracellular, mitochondrion | 5.44 | 12.15 |
| HORVU2Hr1G000620.1 | Barley | extracellular, nucleus, plasma membrane | 5.83 | 11.83 |
| HORVU1Hr1G037640.1 | Barley | cytosol | 1.94 | 9.39 |
| HORVU2Hr1G000760.1 | Barley | cytosol | 1.84 | 4.96 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G093460.12 | EnsemblPlantsGene:HORVU6Hr1G093460 | Gene3D:3.40.50.300 | Gene3D:3.80.10.10 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0043531 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:NB-ARC | InterPro:P-loop_NTPase |
| PANTHER:PTHR44634 | PFAM:PF00931 | PRINTS:PR00364 | SEG:seg | SUPFAM:SSF52058 | SUPFAM:SSF52540 |
| UniParc:UPI000B472E98 | UniProt:A0A287V873 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:579538100..579542289
Molecular Weight (calculated)
115324.0 Da
IEP (calculated)
6.872
GRAVY (calculated)
-0.203
Length
1030 amino acids
Sequence
(BLAST)
(BLAST)
0001: SPGRPLLPES ADGIGMDAVQ DTTSLQAAIR WLLHTILPTL GKLDGWIRQA GLGSEVEGLR DEVEQVDGVV CAVNARSEMR NRSLARSLAA LKELLYAADD
0101: VVDELDCYRL QHKLHGGTPS VCVNYYPTSK TKQKIVEHHH ANFVSMISSG AGPWHWHHHP NQIDGPSNQP PSSSSTGDST QNATADSSSR RKRRRGEDST
0201: DVTAANAGPW NKDRISERIQ DITGQLRDIR GNVRRVLKML GPRSRAGPNH CQSTTTSDPR RGTSGLLQRK VYGRAEEQSY IIELIKECKS DAGLTVLPIV
0301: GIAGVGKTTL AQLVYNHQDL KSQFDLWIWI WVSSSFDETR VTREMLDFVP LGAHEGKCRF PKLPEVLMDR VKSKRVLLIL DDIWDDISDC QWNNLLAPFK
0401: PNNAKGSVVL VTTRIPSVAK KRGTTGPINL DGLKNADFWL MFKACAFGDE NYEEQVSLGE LGRQIAKRLQ GNPLAAETAG TLLREHLTID HWNNILKDED
0501: WKSLQLSGGI MSALKLCFDQ LPYNLQQCFS YCSVFPYGYL FLAEELVRMW ISQGFVMCNH SSMILEGARY YLCDLVNLGF FEKVERKELP SGRTQTYYAM
0601: CGLMHDLSRV VSKTECAAMD GLQYNEVLPT IHHLSILRDG QTGNIPGSEK FEEKIQSIFT SVAKLRTLVL IGQYESSFSE EVFQNAYNLR VLQISATSAD
0701: FHSFRYSFVN LIHLRYLKLD GHVEQGGSLQ LHLHDDSALQ ENATLPALQK VRIGNCGEKQ AILSLEKLPF LTTLKLTNMR GVREVLVPSL EELVLVNMPE
0801: LERCSCTSVA GLVSSLRVLE IRKCEALKVF DLFEKAHNSE TRLQLHSCTS LEDLRIEDCR GIIAIEGLHL VKLRHLNVCK NSIFRGISGE GYHLGSQLDL
0901: FIISDLSLLT TSICKGLTCL QSLIIQFLNC EARRLTDDQE RVLLLHKSLQ ELLFEGCGYL MHLPAGLHSL PALKKLTIKS CSSILRIPKE EVPPSLEELV
1001: IEDCSVELSE QCRLLATSKL KVKIDDDYVN
0101: VVDELDCYRL QHKLHGGTPS VCVNYYPTSK TKQKIVEHHH ANFVSMISSG AGPWHWHHHP NQIDGPSNQP PSSSSTGDST QNATADSSSR RKRRRGEDST
0201: DVTAANAGPW NKDRISERIQ DITGQLRDIR GNVRRVLKML GPRSRAGPNH CQSTTTSDPR RGTSGLLQRK VYGRAEEQSY IIELIKECKS DAGLTVLPIV
0301: GIAGVGKTTL AQLVYNHQDL KSQFDLWIWI WVSSSFDETR VTREMLDFVP LGAHEGKCRF PKLPEVLMDR VKSKRVLLIL DDIWDDISDC QWNNLLAPFK
0401: PNNAKGSVVL VTTRIPSVAK KRGTTGPINL DGLKNADFWL MFKACAFGDE NYEEQVSLGE LGRQIAKRLQ GNPLAAETAG TLLREHLTID HWNNILKDED
0501: WKSLQLSGGI MSALKLCFDQ LPYNLQQCFS YCSVFPYGYL FLAEELVRMW ISQGFVMCNH SSMILEGARY YLCDLVNLGF FEKVERKELP SGRTQTYYAM
0601: CGLMHDLSRV VSKTECAAMD GLQYNEVLPT IHHLSILRDG QTGNIPGSEK FEEKIQSIFT SVAKLRTLVL IGQYESSFSE EVFQNAYNLR VLQISATSAD
0701: FHSFRYSFVN LIHLRYLKLD GHVEQGGSLQ LHLHDDSALQ ENATLPALQK VRIGNCGEKQ AILSLEKLPF LTTLKLTNMR GVREVLVPSL EELVLVNMPE
0801: LERCSCTSVA GLVSSLRVLE IRKCEALKVF DLFEKAHNSE TRLQLHSCTS LEDLRIEDCR GIIAIEGLHL VKLRHLNVCK NSIFRGISGE GYHLGSQLDL
0901: FIISDLSLLT TSICKGLTCL QSLIIQFLNC EARRLTDDQE RVLLLHKSLQ ELLFEGCGYL MHLPAGLHSL PALKKLTIKS CSSILRIPKE EVPPSLEELV
1001: IEDCSVELSE QCRLLATSKL KVKIDDDYVN
0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD
Arabidopsis Description
RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.