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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • cytosol 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol
MultiLoc:cytosol
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G528000.1 Wheat plasma membrane 83.74 87.91
TraesCS3A01G521200.1 Wheat plasma membrane 83.54 87.69
TraesCS3B01G590900.1 Wheat plasma membrane 60.7 83.57
HORVU7Hr1G025750.1 Barley plasma membrane 65.64 67.3
Os08t0389700-02 Rice plasma membrane 63.58 66.45
Os08t0387200-01 Rice plasma membrane 61.93 64.18
CDY70121 Canola plasma membrane 54.94 57.67
Bra000553.1-P Field mustard plasma membrane 54.73 57.58
CDX83221 Canola plasma membrane 54.73 57.58
Bra034269.1-P Field mustard plasma membrane 55.35 57.23
CDX77007 Canola plasma membrane 55.35 57.23
CDY35338 Canola plasma membrane 55.35 57.23
VIT_16s0039g02390.t01 Wine grape cytosol, endoplasmic reticulum, extracellular 11.73 57.0
KRH16236 Soybean plasma membrane 46.71 56.47
KRH62016 Soybean plasma membrane 54.53 56.14
VIT_04s0008g03820.t01 Wine grape golgi, plasma membrane, vacuole 54.94 55.86
KRH52675 Soybean plasma membrane 54.73 55.77
AT2G25737.1 Thale cress plasma membrane 54.53 55.67
PGSC0003DMT400047828 Potato plasma membrane 54.53 55.56
VIT_09s0002g04240.t01 Wine grape mitochondrion, plasma membrane 54.53 55.09
Solyc08g068290.2.1 Tomato plasma membrane 53.7 54.83
Solyc11g071310.1.1 Tomato plasma membrane 53.7 54.72
PGSC0003DMT400028090 Potato plasma membrane 53.09 54.2
GSMUA_Achr7P24830_001 Banana golgi, plasma membrane, vacuole 53.09 53.53
KRH09870 Soybean plasma membrane 47.53 53.47
HORVU5Hr1G041530.2 Barley plastid 63.99 53.34
KRH59081 Soybean plasma membrane 43.0 51.86
PGSC0003DMT400006523 Potato golgi, plasma membrane, vacuole 50.82 51.14
PGSC0003DMT400019612 Potato golgi, plasma membrane, vacuole 49.18 50.96
Solyc12g044230.1.1 Tomato plasma membrane 48.77 50.64
Solyc03g120730.2.1 Tomato plasma membrane 50.0 50.41
GSMUA_Achr4P15550_001 Banana plasma membrane 48.97 50.21
KRH42955 Soybean plasma membrane 44.24 50.12
KRH23445 Soybean plasma membrane 50.21 50.1
VIT_16s0039g02290.t01 Wine grape plasma membrane 16.67 49.09
KRH16240 Soybean plasma membrane 43.83 47.02
KRH59082 Soybean plasma membrane 45.27 46.91
KRH59083 Soybean plasma membrane 45.68 46.74
KRG99999 Soybean plasma membrane 26.75 44.83
PGSC0003DMT400019603 Potato plasma membrane 38.68 43.42
KRH42958 Soybean plasma membrane 45.47 40.77
HORVU4Hr1G009560.2 Barley plastid 39.92 38.19
HORVU7Hr1G012180.2 Barley plastid 23.87 26.79
HORVU3Hr1G077570.1 Barley peroxisome 15.43 22.73
HORVU3Hr1G077530.9 Barley plasma membrane 13.58 14.19
Protein Annotations
EnsemblPlants:HORVU3Hr1G113890.10EnsemblPlantsGene:HORVU3Hr1G113890GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:TM_pro_TauE-like
PANTHER:PTHR14255PANTHER:PTHR14255:SF22PFAM:PF01925SEG:segTMHMM:TMhelixUniParc:UPI000B469F43
UniProt:A0A287MS39MapMan:24.2.6.2::::
Description
No Description!
Coordinates
chrchr3H:+:689525700..689531702
Molecular Weight (calculated)
52371.2 Da
IEP (calculated)
9.600
GRAVY (calculated)
0.584
Length
486 amino acids
Sequence
(BLAST)
001: KLSEKPIKLR DCHLPLGFPG GREMGRKWCA VTVLAITYMV ATTAVAANDK GLSFAGTAAP APEEASSLRK PVSLDGTAHH HVWPTLNAGW RTVLGSFIGF
101: FGAALGSIGG VGGGGIFVPM LTLIVGFDTK SATAMSKCMI TGAAVSTVYC NLKLKHPTLN MPMIDYDLAL LIQPMLMMGV SIGVICNVIF PDWLVTVLFI
201: ILSLVTSTKA FLKGVETWKK ETLMKREAAV KKSKQSSDEI EYTPPTGSDA IAEPRAPSDE AVSIWKNIYW KEFGLLIFVW VAILTLQVAM NYTATCSTMY
301: WVFSLLQIPV SAGVSVYQAV GLVQGKRVIS SRANTKASLK SHIVLIYFFG VSAGVLAGLL GLGGGVIMGP LFLELGIPPQ VSSATATFAM MFSSSIAVVE
401: YYLLNRFPIP YALVFTCVAF IAAIVGQRVA RKVINWLGRA SLIIFILSFM IFIGLIPLGG FGILNINHKM AQHEYMGFHS ICKSDT
Best Arabidopsis Sequence Match ( AT1G11540.1 )
(BLAST)
001: MTIIAGLEMK TASSFSAFMV TGVSFANVGC NLFLRNPKSR DKTLIDFDLA LTIQPCLLLG VSIGVICNRM FPNWLVLFLF AVFLAWSTMK TCKKGVSYWN
101: LESERAKIKS PRDVDGIEVA RSPLLSEERE DVRQRGMIRF PWMKLGVLVI IWLLFFSINL FRGNKYGQGI ISIKPCGALY WFLSSLQIPL TIFFTLCIYF
201: SDNVQSNHTS HSNQNSEQET GVGGRQNKLM LPVMALLAGV LGGLFGIGGG MLISPLLLQI GIAPEVTAAT CSFMVLFSSS MSAIQYLLLG MEHAGTAAIF
301: ALVCFVASLV GLMVVKKVIA KYGRASIIVF AVGIVMALST VLMTTHGAFN VWNDFVSGRY MGFKLPC
Arabidopsis Description
Sulfite exporter TauE/SafE family protein [Source:TAIR;Acc:AT1G11540]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.