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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 8
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400019612 Potato golgi, plasma membrane, vacuole 70.9 65.46
Solyc12g044230.1.1 Tomato plasma membrane 70.21 64.96
PGSC0003DMT400006523 Potato golgi, plasma membrane, vacuole 62.12 55.69
VIT_09s0002g04240.t01 Wine grape mitochondrion, plasma membrane 57.74 51.98
PGSC0003DMT400038560 Potato plasma membrane 54.27 49.37
PGSC0003DMT400028090 Potato plasma membrane 53.35 48.53
PGSC0003DMT400047828 Potato plasma membrane 52.66 47.8
KRH59081 Soybean plasma membrane 44.11 47.39
GSMUA_Achr6P05790_001 Banana plasma membrane 51.5 47.05
TraesCS5B01G184700.1 Wheat plasma membrane 51.04 47.02
TraesCS5D01G191500.1 Wheat plasma membrane 50.81 46.81
KRH09870 Soybean plasma membrane 46.65 46.76
TraesCS5A01G186300.1 Wheat plasma membrane 50.81 46.61
KXG35452 Sorghum plasma membrane 44.34 46.04
Zm00001d020170_P001 Maize plasma membrane 49.88 45.96
GSMUA_Achr10P... Banana plasma membrane 50.35 45.89
EER96605 Sorghum plasma membrane 49.65 45.74
Os09t0344800-01 Rice plasma membrane 50.81 45.74
GSMUA_Achr7P24830_001 Banana golgi, plasma membrane, vacuole 50.81 45.64
Os08t0389700-02 Rice plasma membrane 48.96 45.59
GSMUA_Achr7P10890_001 Banana plasma membrane 49.88 45.57
GSMUA_Achr2P15360_001 Banana plasma membrane 49.65 45.07
KRH42955 Soybean plasma membrane 44.34 44.76
KXG35453 Sorghum plasma membrane 46.88 43.66
KRH23445 Soybean plasma membrane 48.96 43.53
KRH59082 Soybean plasma membrane 47.11 43.5
TraesCS4D01G200900.3 Wheat plasma membrane 45.96 42.98
KRH59083 Soybean plasma membrane 47.11 42.95
TraesCS4B01G199900.1 Wheat plasma membrane 45.73 42.67
GSMUA_Achr4P15550_001 Banana plasma membrane 46.65 42.62
TraesCS7D01G120900.1 Wheat plasma membrane 45.96 41.98
TraesCS7B01G021400.1 Wheat plasma membrane 45.96 41.98
HORVU7Hr1G025750.1 Barley plasma membrane 45.73 41.77
TraesCS3B01G590900.1 Wheat plasma membrane 33.72 41.36
TraesCS4A01G104000.1 Wheat plasma membrane 24.48 41.25
Os08t0387200-01 Rice plasma membrane 44.34 40.94
TraesCS7A01G122400.1 Wheat plasma membrane 45.27 40.41
TraesCS7B01G021300.2 Wheat plasma membrane 35.1 40.32
TraesCS3A01G521200.1 Wheat plasma membrane 42.96 40.17
Zm00001d005629_P001 Maize plasma membrane 45.73 40.0
TraesCS3D01G528000.1 Wheat plasma membrane 42.26 39.52
HORVU5Hr1G041530.2 Barley plastid 52.19 38.77
HORVU3Hr1G113890.10 Barley cytosol, plasma membrane 43.42 38.68
KRH42958 Soybean plasma membrane 47.34 37.82
PGSC0003DMT400007068 Potato plasma membrane 38.57 36.38
PGSC0003DMT400055932 Potato plasma membrane 23.56 22.08
Protein Annotations
EnsemblPlants:PGSC0003DMT400019603EnsemblPlantsGene:PGSC0003DMG400007576GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:TM_pro_TauE-like
PANTHER:PTHR14255PANTHER:PTHR14255:SF6PFAM:PF01925PGSC:PGSC0003DMG400007576SEG:segTMHMM:TMhelix
UniParc:UPI000296CDE2UniProt:M1ACB3MapMan:24.2.6.2:::
Description
Membrane protein [Source:PGSC_GENE;Acc:PGSC0003DMG400007576]
Coordinates
chr12:-:50544595..50548364
Molecular Weight (calculated)
47501.7 Da
IEP (calculated)
7.053
GRAVY (calculated)
0.960
Length
433 amino acids
Sequence
(BLAST)
001: MAEIGKALTG YVVGVIVLAF ALFASAERIA NDATSDDFES GLFNLLLHKA KIHYQHFWPD LEFGWRVIVG SVIGFFAVVF GSLGDDRGDG IFAPMLILII
101: GFDPKTSTAI SVCMITGVSV ATVLLSHPII EHPIIDSDLA LLLTPMLLLG ISIGVVLNVI FAEWMVIVML IILIIVPSTR AFFKGVEVWK EENRMDKMAA
201: KHLVPPNAGA EDIMYKLLPR GPRIRNEEVV YTKDFSILIA VWVIFLVLHI VKVPVAVGVS AYEAVCLYNG TRVVMSSGKE VITVYMGNRV VMSSGEEVIT
301: WKVHQLILYC CCGFLAGIVG GLLGLHGGFI LVPLFLQLGI LPQVSSTTAN FMMIFSSSMS VIQYYLLGRF PVPYAFYFVA VTTVAALVGS HVVDKIIRII
401: NRVSVIIFIL AFTIFVSAVS LGKFLLFSFV YIF
Best Arabidopsis Sequence Match ( AT2G25737.1 )
(BLAST)
001: MTKLRSKWLG LRSVTIFLIN FSLAFAFVSA ERRGKSLRLS TDETRENESS FFLKAINFLW ESDQIGYRHV WPEFEFNWQI VLGTLVGFFG AAFGSVGGVG
101: GGGIFVPMLS LIIGFDPKSA TAISKCMIMG ASVSTVYYNL RLRHPTLDMP IIDYDLALLI QPMLMLGISI GVAFNVIFPD WLVTVLLIVL FLGTSTKAFL
201: KGSETWNKET IEKKEAAKRL ESNGVSGTEV EYVPLPAAPS TNPGNKKKEE VSIIENVYWK ELGLLVFVWI VFLALQISKQ NLANCSVAYW VINLLQIPVA
301: VGVSGYEAVA LYQGRRIIAS KGQGDSNFTV GQLVMYCTFG IIAGIVGGLL GLGGGFIMGP LFLELGVPPQ VSSATATFAM TFSSSMSVVE YYLLKRFPVP
401: YALYLVGVAT IAAWVGQHVV RRLIAAIGRA SLIIFILASM IFISAISLGG VGIVNMIGKI QRHEYMGFEN LCKYGG
Arabidopsis Description
Sulfite exporter TauE/SafE family protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.