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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:mitochondrion
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020170_P001 Maize plasma membrane 92.77 92.77
Os09t0344800-01 Rice plasma membrane 84.26 82.33
TraesCS5B01G184700.1 Wheat plasma membrane 81.28 81.28
TraesCS5D01G191500.1 Wheat plasma membrane 81.06 81.06
TraesCS5A01G186300.1 Wheat plasma membrane 80.85 80.51
KXG35452 Sorghum plasma membrane 65.32 73.62
KXG35453 Sorghum plasma membrane 70.0 70.75
PGSC0003DMT400047828 Potato plasma membrane 67.23 66.25
AT2G25737.1 Thale cress plasma membrane 66.81 65.97
Solyc08g068290.2.1 Tomato plasma membrane 66.6 65.76
HORVU5Hr1G041530.2 Barley plastid 81.49 65.69
KRH62016 Soybean plasma membrane 65.96 65.68
Solyc11g071310.1.1 Tomato plasma membrane 66.6 65.62
PGSC0003DMT400028090 Potato plasma membrane 66.38 65.55
VIT_04s0008g03820.t01 Wine grape golgi, plasma membrane, vacuole 66.6 65.48
CDY70121 Canola plasma membrane 64.04 65.01
Bra000553.1-P Field mustard plasma membrane 63.83 64.94
CDX83221 Canola plasma membrane 63.83 64.94
KRH52675 Soybean plasma membrane 65.74 64.78
GSMUA_Achr7P24830_001 Banana golgi, plasma membrane, vacuole 66.17 64.52
VIT_09s0002g04240.t01 Wine grape mitochondrion, plasma membrane 65.32 63.83
Bra034269.1-P Field mustard plasma membrane 63.62 63.62
CDY35338 Canola plasma membrane 63.62 63.62
CDX77007 Canola plasma membrane 63.62 63.62
KRH16236 Soybean plasma membrane 54.26 63.43
KRH09870 Soybean plasma membrane 57.02 62.04
VIT_16s0039g02390.t01 Wine grape cytosol, endoplasmic reticulum, extracellular 12.77 60.0
GSMUA_Achr4P15550_001 Banana plasma membrane 58.94 58.44
Solyc12g044230.1.1 Tomato plasma membrane 57.66 57.91
KRH23445 Soybean plasma membrane 59.57 57.49
KRH59081 Soybean plasma membrane 48.94 57.07
PGSC0003DMT400019612 Potato golgi, plasma membrane, vacuole 56.81 56.93
KRH42955 Soybean plasma membrane 51.91 56.88
KRH59083 Soybean plasma membrane 56.17 55.58
PGSC0003DMT400006523 Potato golgi, plasma membrane, vacuole 56.81 55.28
Solyc03g120730.2.1 Tomato plasma membrane 56.17 54.77
KRH59082 Soybean plasma membrane 53.83 53.94
VIT_16s0039g02290.t01 Wine grape plasma membrane 18.51 52.73
KRH16240 Soybean plasma membrane 49.79 51.66
KRG99999 Soybean plasma membrane 31.49 51.03
PGSC0003DMT400019603 Potato plasma membrane 45.74 49.65
KRH42958 Soybean plasma membrane 53.62 46.49
EER90953 Sorghum plasma membrane 46.81 45.64
EER96273 Sorghum plasma membrane 27.02 29.4
OQU87698 Sorghum plasma membrane 28.3 25.43
Protein Annotations
EnsemblPlants:EER96605EnsemblPlantsGene:SORBI_3002G176200EntrezGene:8055546GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:TM_pro_TauE-likePANTHER:PTHR14255PANTHER:PTHR14255:SF22PFAM:PF01925ProteinID:EER96605ProteinID:EER96605.1
RefSeq:XP_002460084.1SEG:segSignalP:SignalP-TMTMHMM:TMhelixunigene:Sbi.14816UniParc:UPI0001A83971
UniProt:C5XAJ1MapMan:24.2.6.2::::
Description
hypothetical protein
Coordinates
chr2:+:55534861..55539483
Molecular Weight (calculated)
50779.1 Da
IEP (calculated)
9.295
GRAVY (calculated)
0.622
Length
470 amino acids
Sequence
(BLAST)
001: MGRKCHAAVA LAVAFAAAAA VAVAADRRLS LVRAAVAPEE EMSLFRKVAN LMWKSDGNSY QHVWPTMELG WQIVLGSLIG FFGAAFGSVG GVGGGGIFVP
101: MLTLIIGFDP KSSTAISKCM IMGASVSTVY YNLKLKHPTL DMPVIDYDLA VLIQPMLMLG ISIGVIFNVI FPDWLVTVLL IILFLGTSTK AFLKGIETWK
201: KETIIQREAA KRLEQIAGEE AEYAPLPTGP GAAANKKTLS SDEAPSLIKN IHWKEVGLLS FVWVAFLVLQ VTKNYTATCS PWYWVLNLLQ VPVSVGVTLY
301: EGFGLMSGKR VLSSKGSEQT TMKFHQVVVY GLFGIAAGLV GGLLGLGGGF IMGPLFLELG IPPQVSSATA TFAMMFSSSM SVVEYYLLNR FPVPYAVYFT
401: IVAFAAALIG QHAVRKLINW LGRASLIIFI LAFMIFVSAL SLGGVGISNM VHKIARHEYM GFENLCKYDA
Best Arabidopsis Sequence Match ( AT2G25737.1 )
(BLAST)
001: MTKLRSKWLG LRSVTIFLIN FSLAFAFVSA ERRGKSLRLS TDETRENESS FFLKAINFLW ESDQIGYRHV WPEFEFNWQI VLGTLVGFFG AAFGSVGGVG
101: GGGIFVPMLS LIIGFDPKSA TAISKCMIMG ASVSTVYYNL RLRHPTLDMP IIDYDLALLI QPMLMLGISI GVAFNVIFPD WLVTVLLIVL FLGTSTKAFL
201: KGSETWNKET IEKKEAAKRL ESNGVSGTEV EYVPLPAAPS TNPGNKKKEE VSIIENVYWK ELGLLVFVWI VFLALQISKQ NLANCSVAYW VINLLQIPVA
301: VGVSGYEAVA LYQGRRIIAS KGQGDSNFTV GQLVMYCTFG IIAGIVGGLL GLGGGFIMGP LFLELGVPPQ VSSATATFAM TFSSSMSVVE YYLLKRFPVP
401: YALYLVGVAT IAAWVGQHVV RRLIAAIGRA SLIIFILASM IFISAISLGG VGIVNMIGKI QRHEYMGFEN LCKYGG
Arabidopsis Description
Sulfite exporter TauE/SafE family protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.