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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi, plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G077900.1 Wheat endoplasmic reticulum 92.38 92.75
TraesCS5D01G084300.1 Wheat endoplasmic reticulum, golgi, plastid 90.43 92.42
HORVU5Hr1G018790.1 Barley cytosol 52.93 84.69
HORVU2Hr1G115030.1 Barley endoplasmic reticulum, plasma membrane 83.79 83.95
TraesCS1A01G442100.1 Wheat mitochondrion 16.02 81.19
Os12t0582666-00 Rice plastid 71.48 64.21
PGSC0003DMT400030215 Potato cytosol 24.61 49.22
HORVU5Hr1G096990.1 Barley cytosol 17.38 48.9
VIT_18s0001g09510.t01 Wine grape endoplasmic reticulum 44.53 45.69
Solyc04g078290.2.1 Tomato nucleus 45.51 45.51
PGSC0003DMT400055478 Potato endoplasmic reticulum 45.12 45.47
HORVU2Hr1G011790.4 Barley cytosol 26.95 45.39
PGSC0003DMT400030214 Potato endoplasmic reticulum 44.92 45.19
Solyc12g088460.1.1 Tomato endoplasmic reticulum 44.73 44.99
HORVU2Hr1G000670.1 Barley endoplasmic reticulum, mitochondrion, peroxisome 24.8 44.88
VIT_18s0001g09500.t01 Wine grape endoplasmic reticulum 43.36 44.58
HORVU4Hr1G017200.1 Barley mitochondrion 9.18 44.34
VIT_09s0002g06450.t01 Wine grape endoplasmic reticulum 43.75 44.18
VIT_09s0002g06440.t01 Wine grape endoplasmic reticulum 43.16 43.5
Solyc12g088510.1.1 Tomato endoplasmic reticulum 42.97 43.22
PGSC0003DMT400039833 Potato golgi 43.16 43.16
PGSC0003DMT400039835 Potato cytosol 31.05 42.97
VIT_18s0001g09520.t01 Wine grape golgi 43.75 42.75
HORVU5Hr1G096930.1 Barley endoplasmic reticulum 42.77 42.2
HORVU5Hr1G096950.2 Barley golgi, peroxisome, plastid 43.95 42.06
HORVU5Hr1G096940.8 Barley golgi, peroxisome, plastid 43.95 41.28
VIT_09s0002g06470.t01 Wine grape endoplasmic reticulum 41.21 41.21
VIT_09s0002g06480.t01 Wine grape endoplasmic reticulum 37.5 40.76
HORVU5Hr1G018750.2 Barley endoplasmic reticulum, golgi 40.82 39.58
HORVU2Hr1G063220.1 Barley endoplasmic reticulum, golgi 39.65 39.57
Solyc04g078270.2.1 Tomato endoplasmic reticulum 38.48 38.4
PGSC0003DMT400055477 Potato endoplasmic reticulum 38.48 38.4
HORVU5Hr1G096970.1 Barley endoplasmic reticulum, extracellular 8.2 37.17
HORVU6Hr1G076250.4 Barley endoplasmic reticulum 14.26 36.32
PGSC0003DMT400055474 Potato endoplasmic reticulum, golgi 24.41 31.57
HORVU2Hr1G011820.1 Barley endoplasmic reticulum 18.95 21.85
Protein Annotations
Gene3D:1.10.630.10MapMan:50.1.13UniProt:A0A287QJ00InterPro:Cyt_P450InterPro:Cyt_P450_CSInterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sfGO:GO:0003674GO:GO:0003824GO:GO:0004497GO:GO:0005488GO:GO:0005506
GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016491
GO:GO:0016705GO:GO:0020037GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:HORVU5Hr1G018780EnsemblPlants:HORVU5Hr1G018780.1
InterPro:IPR036396PFAM:PF00067PRINTS:PR00385PRINTS:PR00463ScanProsite:PS00086PANTHER:PTHR24298
PANTHER:PTHR24298:SF153SUPFAM:SSF48264TMHMM:TMhelixUniParc:UPI000B45FEE0SEG:seg:
Description
No Description!
Coordinates
chrchr5H:+:77744694..77746793
Molecular Weight (calculated)
55695.9 Da
IEP (calculated)
8.114
GRAVY (calculated)
0.123
Length
512 amino acids
Sequence
(BLAST)
001: MDATDTERTA SGGVFVLLLL LVAGVVAVFV RLRRRWGGGS ISAPSPPSLP LLGHLHLLKK PLHRSLAALA GSEPLLSLRL GARRALVVST YAAAEECFTA
101: HDAALAGRPR MLAAEHLGYG RTTVVWASHG GHWRGLRRFL NVELFSTSRL AALAGDRHAE VASLVQNLLH DANASAGGGT VILRPRLFEL VLNVMLRALT
201: ARRLAGDVRR IQEIVEETFA VSGAPSIGDF FPALRWVDRL RGVEAALVSL QTRRDAFVGA LIDGHRRMRN AGGRDVEKKG VIDVLLEHQE ADPGYYTDTV
301: VKGIVLVLLT AGTDTSALTT EWAMALLLKH PEVMRKARAE IDANIGMGRL VEESDITNLP YLQCVVKETL RLCPVGPIIP AHEAMEDCTV GGFHVQRGTM
401: ILVNAWAIHR DAKIWDAPEE FRPERFMDRD TVTTPMLPFG FGRRRCPGEG LAMRLVSLTV AALVQCFEWD AGEGDTIDMA EGGGLTMPMA SPLVTVCRPR
501: EFVKGVLSAS TW
Best Arabidopsis Sequence Match ( AT4G37340.1 )
(BLAST)
001: MEGQTLIFTF LFISLSLTFI IGRIKRRPNL PPSPSWALPV IGHLRLLKPP LHRVFLSVSE SLGDAPIISL RLGNRLVFVV SSHSLAEECF TKNDVVLANR
101: FNSLASKHIS YGCTTVVTAS YGDHWRNLRR IGAVEIFSAH RLNSFSSIRR DEIHRLIACL SRNSSLEFTK VEMKSMFSNL TFNNIIRMLA GKCYYGDGAE
201: DDPEAKRVRE LIAEGMGCFG AGNTADYLPI LTWITGSEKR IKKIASRLDE FLQGLVDERR EGKEKRQNTM VDHLLCLQET QPEYYTDNII KGIMLSLILA
301: GTDTSAVTLE WTLSALLNHP QILSKARDEI DNKVGLNRLV EESDLSHLPY LQNIVSESLR LYPASPLLVP HVASEDCKVG GYHMPRGTML LTNAWAIHRD
401: PKIWDDPTSF KPERFEKEGE AQKLLGFGLG RRACPGSGLA QRLASLTIGS LIQCFEWERI GEEEVDMTEG GGGVIMPKAI PLVAMCKARP VVGKILNESA
Arabidopsis Description
CYP81D3Cytochrome P450, family 81, subfamily D, polypeptide 3 [Source:UniProtKB/TrEMBL;Acc:O23154]
SUBAcon: [endoplasmic reticulum,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.