Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G084300.1 | Wheat | endoplasmic reticulum, golgi, plastid | 80.2 | 16.17 |
| TraesCS5B01G077900.1 | Wheat | endoplasmic reticulum | 81.19 | 16.08 |
| HORVU5Hr1G018780.1 | Barley | endoplasmic reticulum, golgi, plasma membrane | 81.19 | 16.02 |
| TraesCS5A01G071800.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 77.23 | 15.2 |
| PGSC0003DMT400030215 | Potato | cytosol | 37.62 | 14.84 |
| TraesCS7A01G224400.1 | Wheat | cytosol | 28.71 | 14.22 |
| TraesCS2A01G520500.1 | Wheat | endoplasmic reticulum, plasma membrane | 72.28 | 14.2 |
| Os12t0582666-00 | Rice | plastid | 72.28 | 12.81 |
| TraesCS6A01G120900.1 | Wheat | cytosol | 36.63 | 12.71 |
| TraesCS6A01G121000.1 | Wheat | endoplasmic reticulum, plastid, vacuole | 63.37 | 12.65 |
| TraesCS2A01G562200.1 | Wheat | cytosol | 33.66 | 10.9 |
| PGSC0003DMT400039835 | Potato | cytosol | 35.64 | 9.73 |
| TraesCS5A01G071700.1 | Wheat | endoplasmic reticulum | 47.52 | 9.16 |
| VIT_18s0001g09500.t01 | Wine grape | endoplasmic reticulum | 44.55 | 9.04 |
| Solyc04g078290.2.1 | Tomato | nucleus | 45.54 | 8.98 |
| TraesCS3A01G513900.2 | Wheat | endoplasmic reticulum, golgi | 37.62 | 8.98 |
| PGSC0003DMT400055478 | Potato | endoplasmic reticulum | 44.55 | 8.86 |
| TraesCS2A01G059400.1 | Wheat | endoplasmic reticulum | 45.54 | 8.83 |
| TraesCS5A01G397900.1 | Wheat | endoplasmic reticulum | 44.55 | 8.72 |
| VIT_09s0002g06480.t01 | Wine grape | endoplasmic reticulum | 40.59 | 8.7 |
| VIT_09s0002g06450.t01 | Wine grape | endoplasmic reticulum | 43.56 | 8.68 |
| Solyc12g088460.1.1 | Tomato | endoplasmic reticulum | 43.56 | 8.64 |
| VIT_18s0001g09510.t01 | Wine grape | endoplasmic reticulum | 42.57 | 8.62 |
| VIT_18s0001g09520.t01 | Wine grape | golgi | 44.55 | 8.59 |
| VIT_09s0002g06440.t01 | Wine grape | endoplasmic reticulum | 42.57 | 8.46 |
| PGSC0003DMT400030214 | Potato | endoplasmic reticulum | 42.57 | 8.45 |
| TraesCS5A01G057800.1 | Wheat | endoplasmic reticulum, extracellular | 14.85 | 8.38 |
| TraesCS5A01G398000.1 | Wheat | endoplasmic reticulum | 42.57 | 8.33 |
| TraesCS2A01G262800.1 | Wheat | endoplasmic reticulum, plastid | 42.57 | 8.29 |
| VIT_09s0002g06470.t01 | Wine grape | endoplasmic reticulum | 41.58 | 8.2 |
| TraesCS2A01G534600.1 | Wheat | cytosol, endoplasmic reticulum, plastid | 43.56 | 8.03 |
| TraesCS5A01G397800.1 | Wheat | endoplasmic reticulum, extracellular | 39.6 | 7.83 |
| PGSC0003DMT400039833 | Potato | golgi | 39.6 | 7.81 |
| Solyc04g078270.2.1 | Tomato | endoplasmic reticulum | 39.6 | 7.8 |
| PGSC0003DMT400055477 | Potato | endoplasmic reticulum | 39.6 | 7.8 |
| TraesCS5A01G397700.1 | Wheat | endoplasmic reticulum, extracellular | 39.6 | 7.68 |
| Solyc12g088510.1.1 | Tomato | endoplasmic reticulum | 38.61 | 7.66 |
| TraesCS3A01G039600.1 | Wheat | endoplasmic reticulum | 38.61 | 7.43 |
| PGSC0003DMT400055474 | Potato | endoplasmic reticulum, golgi | 23.76 | 6.06 |
| TraesCS3A01G270700.1 | Wheat | cytosol | 5.94 | 3.08 |
| TraesCS2A01G281300.1 | Wheat | mitochondrion | 2.97 | 1.32 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G442100.1 | EnsemblPlantsGene:TraesCS1A01G442100 | Gene3D:1.10.630.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005506 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016705 | GO:GO:0020037 | GO:GO:0055114 |
| InterPro:Cyt_P450 | InterPro:Cyt_P450_E_grp-I | InterPro:Cyt_P450_sf | InterPro:IPR036396 | PANTHER:PTHR24298 | PANTHER:PTHR24298:SF153 |
| PFAM:PF00067 | PRINTS:PR00385 | PRINTS:PR00463 | SUPFAM:SSF48264 | MapMan:50.1.13 | : |
Description
No Description!
Coordinates
chr1A:-:590766574..590768281
Molecular Weight (calculated)
11011.7 Da
IEP (calculated)
8.241
GRAVY (calculated)
0.079
Length
101 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPRRRQSGR SGLATEMAVR GVVLLIAGTD TSALTTEWAM ALLVKHPEVT RKMRAEIDAN VGMGRLVEES DITNLPYLQC VVKETLRLCP VGPIIPAHEA
101: M
101: M
001: MVSAPYSEHW RNLRRIGAVE IFSNHRLNSF YTIRRDEIRR LIARLSRSPN ASLEFAKVEM NSMLSNLAFN NIIRMVTGKC YYGDGAEDDP EAKRVRQLIA
101: EAMSCFGAGH AADHLPMLRW ITDFERRVKK IAARLDEFFQ RLVDEKRVAK EKKENTMIDH LLSLQVSQPE YYTDHTIKGT MLSLILAGTD TSAVTLEWAL
201: SSLLNNPEVL KKVRDEIDNQ IGLDRLLEES DIPNLPYLQN IVSETLRLYP AGPLLVPHIS SEDCKVGGYD MPCGTMLLVN VWAIHRDPRL WDDPASFKPE
301: RFEKEGETHK LLTFGLGRRA CPGSGLARRL VSLSLGSLIQ CFEWERIGEE EVDMTEGGGL TMPRAIPLVA MCRARAFVGK IPHESG
101: EAMSCFGAGH AADHLPMLRW ITDFERRVKK IAARLDEFFQ RLVDEKRVAK EKKENTMIDH LLSLQVSQPE YYTDHTIKGT MLSLILAGTD TSAVTLEWAL
201: SSLLNNPEVL KKVRDEIDNQ IGLDRLLEES DIPNLPYLQN IVSETLRLYP AGPLLVPHIS SEDCKVGGYD MPCGTMLLVN VWAIHRDPRL WDDPASFKPE
301: RFEKEGETHK LLTFGLGRRA CPGSGLARRL VSLSLGSLIQ CFEWERIGEE EVDMTEGGGL TMPRAIPLVA MCRARAFVGK IPHESG
Arabidopsis Description
At1g66540 [Source:UniProtKB/TrEMBL;Acc:A2RVN3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.