Factsheet for TraesCS3A01G039600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 3
endoplasmic reticulum 5
vacuole 3
plasma membrane 3
golgi 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G043900.1	Wheat	endoplasmic reticulum, golgi	59.81	89.71
TraesCS3D01G040200.1	Wheat	endoplasmic reticulum, golgi	84.19	79.78
TraesCS2A01G262800.1	Wheat	endoplasmic reticulum, plastid	60.19	60.89
TraesCS5A01G398000.1	Wheat	endoplasmic reticulum	57.71	58.72
TraesCS2A01G534600.1	Wheat	cytosol, endoplasmic reticulum, plastid	60.95	58.39
TraesCS5A01G397800.1	Wheat	endoplasmic reticulum, extracellular	56.76	58.32
TraesCS5A01G397900.1	Wheat	endoplasmic reticulum	56.76	57.75
TraesCS5A01G057800.1	Wheat	endoplasmic reticulum, extracellular	19.62	57.54
TraesCS5A01G397700.1	Wheat	endoplasmic reticulum, extracellular	55.24	55.66
TraesCS2A01G562200.1	Wheat	cytosol	31.81	53.53
PGSC0003DMT400030215	Potato	cytosol	24.57	50.39
TraesCS3A01G270700.1	Wheat	cytosol	18.1	48.72
TraesCS2A01G281300.1	Wheat	mitochondrion	21.14	48.68
TraesCS2A01G059400.1	Wheat	endoplasmic reticulum	45.71	46.07
VIT_18s0001g09510.t01	Wine grape	endoplasmic reticulum	42.29	44.49
VIT_09s0002g06450.t01	Wine grape	endoplasmic reticulum	41.9	43.39
VIT_18s0001g09500.t01	Wine grape	endoplasmic reticulum	41.14	43.37
VIT_09s0002g06440.t01	Wine grape	endoplasmic reticulum	41.14	42.52
PGSC0003DMT400030214	Potato	endoplasmic reticulum	41.14	42.44
TraesCS5A01G071700.1	Wheat	endoplasmic reticulum	42.29	42.37
Solyc12g088460.1.1	Tomato	endoplasmic reticulum	40.95	42.24
VIT_09s0002g06470.t01	Wine grape	endoplasmic reticulum	40.76	41.8
PGSC0003DMT400055478	Potato	endoplasmic reticulum	40.38	41.73
PGSC0003DMT400039835	Potato	cytosol	29.33	41.62
PGSC0003DMT400039833	Potato	golgi	40.38	41.41
Solyc12g088510.1.1	Tomato	endoplasmic reticulum	40.0	41.26
Solyc04g078290.2.1	Tomato	nucleus	40.0	41.02
TraesCS3A01G513900.2	Wheat	endoplasmic reticulum, golgi	32.95	40.9
TraesCS6A01G120900.1	Wheat	cytosol	22.29	40.21
VIT_09s0002g06480.t01	Wine grape	endoplasmic reticulum	36.0	40.13
TraesCS2A01G520500.1	Wheat	endoplasmic reticulum, plasma membrane	38.86	39.69
TraesCS5A01G071800.1	Wheat	endoplasmic reticulum, plastid, vacuole	38.1	38.99
VIT_18s0001g09520.t01	Wine grape	golgi	38.67	38.74
TraesCS7A01G224400.1	Wheat	cytosol	15.05	38.73
TraesCS1A01G442100.1	Wheat	mitochondrion	7.43	38.61
Solyc04g078270.2.1	Tomato	endoplasmic reticulum	36.57	37.43
PGSC0003DMT400055477	Potato	endoplasmic reticulum	36.57	37.43
TraesCS6A01G121000.1	Wheat	endoplasmic reticulum, plastid, vacuole	36.0	37.35
PGSC0003DMT400055474	Potato	endoplasmic reticulum, golgi	22.48	29.8

Protein Annotations

Gene3D:1.10.630.10	MapMan:50.1.13	ncoils:Coil	InterPro:Cyt_P450	InterPro:Cyt_P450_CS	InterPro:Cyt_P450_E_grp-I
InterPro:Cyt_P450_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005506	GO:GO:0008150
GO:GO:0008152	GO:GO:0016705	GO:GO:0020037	GO:GO:0055114	InterPro:IPR036396	PFAM:PF00067
PRINTS:PR00385	PRINTS:PR00463	ScanProsite:PS00086	PANTHER:PTHR24298	PANTHER:PTHR24298:SF194	SUPFAM:SSF48264
SignalP:SignalP-TM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3A01G039600	EnsemblPlants:TraesCS3A01G039600.1	SEG:seg	:

Description

No Description!

Coordinates

chr3A:+:20950910..20952577

Molecular Weight (calculated)

57717.6 Da

IEP (calculated)

9.254

GRAVY (calculated)

-0.082

Length

525 amino acids

Sequence
(BLAST)

001: MAMSNLMLVL TVVMVSATTC LLMMRRKKRL PPGPGLALPL VGHLHLLREK PLHATLAGLA ARHGPVLSLR LGRRAAVVVT SLRLAKECFS SDHDVNFANR
101: PCFPSAREVS FGYMGLSAAS YGPHWRAMRR IATVHLLSAR RVDLMSDAAI AGETRAMVRR LARAAAGGVA RVELKRNLFE LSHGVLMQAI AGAKGKRGAG
201: SDADMSEEAH EFKKVVDEIV PLLGMANLHD HLPAPLRWLD LGGVRRRLTE LVNRRNALMH GLIDAERQRR RQEDHAADEE ELLPESKSMI GVMLQLQESD
301: PQLYTDTFIA ALVTNLFGGG TVTTSATMEW AMSLLLNQPD ALRKAREEVS ARVGHARLLG KEDLPHLPYL RCIISETLRL YPAAPLLSPH ESSADCSLHG
401: YHLPAGTMLL VNAYAIHRDP SVWDNPEEFR PERFDSNGAD GQGQQGMMML PFGMGRRRCP GESLALRTMG LVLGTLIQCF DWSRVAADEV DMTQASAKIL
501: YKAVPLVALC RPHDNMRAML QSGSS

Best Arabidopsis Sequence Match ( AT4G37320.1 )
(BLAST)

001: MDLTQILLLS FLFLTISIKL LLTKSNRKPN LPPSPAYPLP VIGHLHLLKQ PVHRTFHSIS KSLGNAPIFH LRLGNRLVYV ISSHSIAEEC FTKNDVVLAN
101: RPDIIMAKHV GYNFTNMIAA SYGDHWRNLR RIAAVEIFSS HRISTFSSIR KDEIRRLITH LSRDSLHGFV EVELKSLLTN LAFNNIIMMV AGKRYYGTGT
201: EDNDEAKLVR ELIAEIMAGA GSGNLADYLP SINWVTNFEN QTKILGNRLD RVLQKLVDEK RAEKEKGQTL IDHLLSFQET EPEYYTDVII KGIILALVLA
301: GTDTSSVTLE WAMSNLLNHP EILEKARAEI DDKIGSDRLV EESDIVNLHY LQNIVSETLR LYPAVPLLLP HFSSDECKVA GYDMPRRTLL LTNVWAMHRD
401: PGLWEEPERF KPERFEKEGE ARKLMPFGMG RRACPGAELG KRLVSLALGC LIQSFEWERV GAELVDMTEG EGITMPKATP LRAMCKARAI VGKTI

Arabidopsis Description

CYP81D5Cytochrome P450, family 81, subfamily D, polypeptide 5 [Source:UniProtKB/TrEMBL;Acc:O23156]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.