Factsheet for HORVU6Hr1G001310.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G089610.2	Barley	mitochondrion	57.31	35.84
HORVU3Hr1G080190.1	Barley	mitochondrion	46.42	29.72
Os11t0679700-01	Rice	golgi, mitochondrion, plasma membrane	45.56	29.28
Zm00001d007714_P001	Maize	plasma membrane	41.55	27.62
EES08969	Sorghum	mitochondrion	41.55	24.96
VIT_07s0005g01760.t01	Wine grape	plasma membrane	29.8	19.89
KRH68289	Soybean	endoplasmic reticulum, plasma membrane	29.8	19.3
KRH68291	Soybean	mitochondrion	28.08	19.25
HORVU5Hr1G022500.1	Barley	cytosol	28.94	18.57
KRH69194	Soybean	golgi, plasma membrane, plastid	29.51	18.56
KRH31769	Soybean	golgi	29.51	18.53
KRG96552	Soybean	plasma membrane	28.65	18.52
HORVU2Hr1G023650.5	Barley	mitochondrion	28.08	18.46
HORVU5Hr1G116920.5	Barley	mitochondrion	29.23	18.18
Bra036303.1-P	Field mustard	plasma membrane	23.21	17.76
CDY22016	Canola	plasma membrane	23.21	17.76
HORVU3Hr1G084990.1	Barley	plasma membrane	25.21	17.71
Bra000903.1-P	Field mustard	mitochondrion, plasma membrane	26.36	17.69
CDY07108	Canola	plasma membrane	22.92	17.54
AT4G01950.2	Thale cress	cytosol, golgi, peroxisome	27.51	17.52
HORVU1Hr1G073340.2	Barley	plasma membrane	24.93	17.4
HORVU3Hr1G029770.4	Barley	endoplasmic reticulum, golgi	26.65	17.32
HORVU2Hr1G081970.3	Barley	mitochondrion	24.07	17.21
KRH16640	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	24.64	17.03
HORVU4Hr1G074470.4	Barley	plastid	25.5	16.98
AT1G02390.1	Thale cress	plasma membrane	25.79	16.98
CDY15240	Canola	endoplasmic reticulum, golgi	22.06	16.92
Bra033323.1-P	Field mustard	endoplasmic reticulum, golgi	22.06	16.92
KRH18844	Soybean	plasma membrane	24.36	16.9
CDX89973	Canola	endoplasmic reticulum, golgi	21.78	16.7
KRH16642	Soybean	plasma membrane	23.21	16.3
HORVU1Hr1G032150.4	Barley	peroxisome	24.64	15.93
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	22.64	15.46
HORVU3Hr1G056830.3	Barley	cytosol, plasma membrane	24.64	14.78
HORVU1Hr1G072590.2	Barley	mitochondrion	22.92	14.52
HORVU6Hr1G006810.7	Barley	mitochondrion	26.07	14.51
HORVU4Hr1G011110.4	Barley	plastid	24.07	13.46
CDY71692	Canola	golgi, plasma membrane	6.02	6.82

Protein Annotations

EnsemblPlants:HORVU6Hr1G001310.1	EnsemblPlantsGene:HORVU6Hr1G001310	PANTHER:PTHR15486	PANTHER:PTHR15486:SF21	SEG:seg	UniParc:UPI000B46D59B
UniProt:A0A287T4G9	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:4293361..4296807

Molecular Weight (calculated)

38272.6 Da

IEP (calculated)

8.723

GRAVY (calculated)

-0.044

Length

349 amino acids

Sequence
(BLAST)

001: RVFSCYSPHP IYARYSLLYW WWYNKLAHLT SMSKNQRLFS ALHGTRPPIL SKVTATHPSM VEKLAAGGTL VHDVDTGLLL PSSSFPFPYF MLVALEAGGY
101: LRGLVLLLLY PIILCMGGDS DPAVRLMAMV AFCGLRPSQF LAGCAVLPKW LIEDVAAEGF ETMRMSGAAG GRRVCVTRKL PRVIVEGFLR EYLGAEAVIG
201: KEMKVLWGFY TGLMEEGDEG MLDEQHKIMR EGDDAVGFSG SLQFLQHPLS RCLECVPGDT GGESYVAGTA PEQVPQGHGV PRRPPRLPAN SRQHGRHVHV
301: VALGCSPWGL PPGRHARHAI SIFHDDRGGH RHVLAPQAGR RASDQVAGR

Best Arabidopsis Sequence Match ( AT4G01950.2 )
(BLAST)

001: MHCLKPNKEN TRRKEKKSKK KSFLQNPNMS AKISIFQALV FLFYRFILRR YRNSKPKYQN GPSSLLQSDL SRHTLIFNVE GALLKSDSLF PYFMLVAFEA
101: GGVIRSFLLF ILYPLISLMS HEMGVKVMVM VSFFGIKKEG FRAGRAVLPK YFLEDVGLEM FEVLKRGGKK IGVSDDLPQV MIEGFLRDYL EIDVVVGREM
201: KVVGGYYLGI MEDKTKHDLV FDELVRKERL NTGRVIGITS FNTSLHRYLF SQFCQEIYFV KKSDKRSWQT LPRSQYPKPL IFHDGRLAIK PTLMNTLVLF
301: MWGPFAAAAA AARLFVSLCI PYSLSIPILA FSGCRLTVTN DYVSSQKQKP SQRKGCLFVC NHRTLLDPLY VAFALRKKNI KTVTYSLSRV SEILAPIKTV
401: RLTRDRVSDG QAMEKLLTEG DLVVCPEGTT CREPYLLRFS PLFTEVSDVI VPVAVTVHVT FFYGTTASGL KALDPLFFLL DPYPTYTIQF LDPVSGATCQ
501: DPDGKLKFEV ANNVQSDIGK ALDFECTSLT RKDKYLILAG NNGVVKKN

Arabidopsis Description

ATGPAT3glycerol-3-phosphate acyltransferase 3 [Source:TAIR;Acc:AT4G01950]
SUBAcon: [peroxisome,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.