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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 4
  • golgi 3
  • plastid 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:mitochondrion
Plant-mPloc:endoplasmic reticulum
Predotar:mitochondrion
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007714_P001 Maize plasma membrane 78.14 86.48
TraesCSU01G250600.1 Wheat cytosol, extracellular 20.31 78.67
TraesCSU01G241800.1 Wheat cytosol 19.97 78.38
TraesCS3A01G339700.1 Wheat mitochondrion 65.92 70.79
TraesCS3B01G371300.1 Wheat mitochondrion, plasma membrane, plastid 65.06 70.52
TraesCS3D01G333200.1 Wheat mitochondrion 65.23 69.93
HORVU3Hr1G080190.1 Barley mitochondrion 65.06 69.36
Os11t0679700-01 Rice golgi, mitochondrion, plasma membrane 64.72 69.24
TraesCS4A01G171600.1 Wheat mitochondrion 52.5 67.93
TraesCS4D01G143600.1 Wheat mitochondrion 63.17 65.89
TraesCSU01G033700.1 Wheat plastid 60.76 65.25
HORVU4Hr1G089610.2 Barley mitochondrion 60.76 63.26
KXG23710 Sorghum plastid 55.59 53.57
TraesCSU01G069100.1 Wheat plastid 53.36 52.81
Bra036303.1-P Field mustard plasma membrane 38.9 49.56
CDY22016 Canola plasma membrane 38.9 49.56
CDY71692 Canola golgi, plasma membrane 26.16 49.35
CDY07108 Canola plasma membrane 38.21 48.68
Bra033323.1-P Field mustard endoplasmic reticulum, golgi 36.83 47.03
CDY15240 Canola endoplasmic reticulum, golgi 36.66 46.81
CDX89973 Canola endoplasmic reticulum, golgi 36.66 46.81
KXG32181 Sorghum endoplasmic reticulum, plasma membrane, plastid 43.89 45.95
VIT_07s0005g01760.t01 Wine grape plasma membrane 40.96 45.51
KRH68291 Soybean mitochondrion 39.41 44.99
KXG37209 Sorghum mitochondrion 43.37 44.29
Bra000903.1-P Field mustard mitochondrion, plasma membrane 39.41 44.04
KRH16640 Soybean endoplasmic reticulum, golgi, plasma membrane, plastid 38.04 43.76
KRG96552 Soybean plasma membrane 40.62 43.7
AT4G01950.2 Thale cress cytosol, golgi, peroxisome 41.14 43.61
KRH68289 Soybean endoplasmic reticulum, plasma membrane 40.1 43.23
KRH18844 Soybean plasma membrane 37.35 43.14
KRH16642 Soybean plasma membrane 36.49 42.66
AT1G02390.1 Thale cress plasma membrane 38.9 42.64
OQU86769 Sorghum mitochondrion 39.24 42.46
EES18528 Sorghum mitochondrion 36.32 42.45
KRH31769 Soybean golgi 39.93 41.73
KRH69194 Soybean golgi, plasma membrane, plastid 39.76 41.62
HORVU6Hr1G001310.1 Barley mitochondrion 24.96 41.55
EES04353 Sorghum plastid 36.83 41.31
EER90914 Sorghum plasma membrane 35.11 40.4
EER91628 Sorghum cytosol 35.46 39.77
KXG40111 Sorghum cytosol, peroxisome, plasma membrane 35.63 39.5
EES01127 Sorghum mitochondrion 38.04 38.64
EES03906 Sorghum golgi, peroxisome, plasma membrane 32.7 37.77
EES18341 Sorghum plastid 33.56 37.36
KXG22121 Sorghum endoplasmic reticulum, golgi, plasma membrane 31.84 36.27
Protein Annotations
MapMan:5.2.1.3.1EntrezGene:8082104UniProt:C5Y7X7EnsemblPlants:EES08969ProteinID:EES08969ProteinID:EES08969.1
GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0010143GO:GO:0016020GO:GO:0016311GO:GO:0016740GO:GO:0016746
GO:GO:0016787GO:GO:0016791GO:GO:0090447PFAM:PF01553PANTHER:PTHR15486PANTHER:PTHR15486:SF21
InterPro:Plipid/glycerol_acylTrfaseSMART:SM00563EnsemblPlantsGene:SORBI_3005G214400SUPFAM:SSF69593unigene:Sbi.4420SignalP:SignalP-noTM
UniParc:UPI0001A8638FRefSeq:XP_002449981.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr5:+:70061854..70064960
Molecular Weight (calculated)
62710.8 Da
IEP (calculated)
9.500
GRAVY (calculated)
0.146
Length
581 amino acids
Sequence
(BLAST)
001: MAKKSSRLLL AHKLFSAMLS LLLHGRRPPP PPPPHYSGGW SSSTPPPVVH HGAANNLPPS TLDAAAAAIV VDVDTALLRS GDLFPYFMLV ALEAGGFLRG
101: LILLLLCPLI RLLLPRGAAV SAMAAVSFCG LRTGRSRFRA GSAVLPKWLM EDVAAEAFEV VRRAAGSSRR KVVVVCVTAM PRVMVDGFLR EYLLGVETTV
201: VVAREMKVVC GFYTGFMEDL PPEVEEMVMK TVAAAVVEEE EESGDKQAAV VGFSGSMEFL NHPLARCCKE IFVVSSDEKR RWRPLARDKY PKPMVFHDGR
301: LAFRPTAADT AAMFAWLPLG VALGAARLAV ALTVPYRYST PILAATGMSW RLKGSRPPLP SGGGGRGQLF VCNHRTLIDP VYVSVALDRQ VRAVSYSLSR
401: LSELISPIGR TVRLTRDRDS DGAVMARLLD GGNLVVVCPE GTTCREPYLL RFSPLFAELS DDVVPVGIAV ETSMFYATTA GGLKCFDPLY YMVNPRMCYT
501: VQFLEKVDTS AVRSRAAPST DMANLVQRKM GEALGYGCTM LTRKDKYLML AGNDGVVRST GDKSASASAP PAGAATGRKN S
Best Arabidopsis Sequence Match ( AT4G01950.2 )
(BLAST)
001: MHCLKPNKEN TRRKEKKSKK KSFLQNPNMS AKISIFQALV FLFYRFILRR YRNSKPKYQN GPSSLLQSDL SRHTLIFNVE GALLKSDSLF PYFMLVAFEA
101: GGVIRSFLLF ILYPLISLMS HEMGVKVMVM VSFFGIKKEG FRAGRAVLPK YFLEDVGLEM FEVLKRGGKK IGVSDDLPQV MIEGFLRDYL EIDVVVGREM
201: KVVGGYYLGI MEDKTKHDLV FDELVRKERL NTGRVIGITS FNTSLHRYLF SQFCQEIYFV KKSDKRSWQT LPRSQYPKPL IFHDGRLAIK PTLMNTLVLF
301: MWGPFAAAAA AARLFVSLCI PYSLSIPILA FSGCRLTVTN DYVSSQKQKP SQRKGCLFVC NHRTLLDPLY VAFALRKKNI KTVTYSLSRV SEILAPIKTV
401: RLTRDRVSDG QAMEKLLTEG DLVVCPEGTT CREPYLLRFS PLFTEVSDVI VPVAVTVHVT FFYGTTASGL KALDPLFFLL DPYPTYTIQF LDPVSGATCQ
501: DPDGKLKFEV ANNVQSDIGK ALDFECTSLT RKDKYLILAG NNGVVKKN
Arabidopsis Description
ATGPAT3glycerol-3-phosphate acyltransferase 3 [Source:TAIR;Acc:AT4G01950]
SUBAcon: [peroxisome,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.