Factsheet for TraesCS4D01G143600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G241800.1	Wheat	cytosol	25.49	95.95
TraesCS4A01G171600.1	Wheat	mitochondrion	77.02	95.55
TraesCSU01G250600.1	Wheat	cytosol, extracellular	25.67	95.33
TraesCSU01G069100.1	Wheat	plastid	82.23	78.02
TraesCS3D01G333200.1	Wheat	mitochondrion	73.25	75.28
Os11t0679700-01	Rice	golgi, mitochondrion, plasma membrane	69.48	71.27
Zm00001d007714_P001	Maize	plasma membrane	63.91	67.81
EES08969	Sorghum	mitochondrion	65.89	63.17
TraesCS5D01G099700.1	Wheat	plasma membrane	58.53	60.82
CDY71692	Canola	golgi, plasma membrane	28.37	51.3
CDY22016	Canola	plasma membrane	40.93	50.0
Bra036303.1-P	Field mustard	plasma membrane	40.93	50.0
CDY07108	Canola	plasma membrane	40.4	49.34
VIT_07s0005g01760.t01	Wine grape	plasma membrane	46.32	49.33
Bra033323.1-P	Field mustard	endoplasmic reticulum, golgi	39.32	48.13
CDY15240	Canola	endoplasmic reticulum, golgi	39.14	47.91
CDX89973	Canola	endoplasmic reticulum, golgi	39.14	47.91
TraesCS2D01G136700.1	Wheat	mitochondrion	43.63	46.02
TraesCS1D01G222100.1	Wheat	mitochondrion, plastid	40.04	45.88
KRH68291	Soybean	mitochondrion	41.47	45.38
AT4G01950.2	Thale cress	cytosol, golgi, peroxisome	43.81	44.53
KRH69194	Soybean	golgi, plasma membrane, plastid	44.34	44.5
KRH16642	Soybean	plasma membrane	39.68	44.47
Bra000903.1-P	Field mustard	mitochondrion, plasma membrane	41.29	44.23
KRH16640	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	40.04	44.16
KRH68289	Soybean	endoplasmic reticulum, plasma membrane	42.73	44.16
KRG96552	Soybean	plasma membrane	42.73	44.07
TraesCS4D01G280800.1	Wheat	peroxisome	39.5	44.0
KRH31769	Soybean	golgi	43.81	43.88
AT1G02390.1	Thale cress	plasma membrane	41.65	43.77
KRH18844	Soybean	plasma membrane	39.5	43.74
TraesCS3D01G155000.1	Wheat	mitochondrion	41.83	43.39
TraesCS6D01G043000.1	Wheat	mitochondrion	39.32	43.37
TraesCS2D01G332900.1	Wheat	mitochondrion, plastid	39.14	43.08
TraesCS5D01G512000.1	Wheat	mitochondrion	42.73	42.27
TraesCS3D01G225300.1	Wheat	mitochondrion, plasma membrane	40.22	41.79
TraesCS7D01G498800.1	Wheat	mitochondrion	38.06	41.25
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	36.27	40.64
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	36.8	40.12
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	35.91	39.14
TraesCS1D01G282300.1	Wheat	plasma membrane	35.73	38.57
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	32.5	32.85
TraesCS3D01G225400.1	Wheat	mitochondrion	14.36	31.13

Protein Annotations

EnsemblPlants:TraesCS4D01G143600.1	EnsemblPlantsGene:TraesCS4D01G143600	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	InterPro:Plipid/glycerol_acylTrfase	PANTHER:PTHR15486	PANTHER:PTHR15486:SF21	PFAM:PF01553
SEG:seg	SMART:SM00563	SUPFAM:SSF69593	MapMan:5.2.1.3.1	:	:

Description

No Description!

Coordinates

chr4D:-:131041077..131043376

Molecular Weight (calculated)

61248.2 Da

IEP (calculated)

9.473

GRAVY (calculated)

0.095

Length

557 amino acids

Sequence
(BLAST)

001: MAKKQKLFSA LLSFILHGTR PPISSRVTAT AMTESSPHPS SLHHLGRSSH PPMAEKIAAG RTLVLDVDAA LLLPSSSSLF PYFMLVALEA GGYLRGLVLL
101: LLYPIILSMG RASDVAVRVM AMVAFCGLRA SRFRAGRAVL PKWFMEDVAA EGFEAMRMSN ATGGRRVCVT RWLPRVMVEG LLRDYLGAEA VVGKEMKVLW
201: GFYTGLMEEE DEVVLEEEKK IMAEGDDALG FCGSLEFLLH PLSRSCKDIY LATRDDRATW QALPRSKYPK AVVFHDGRLA FRPTAGSTLA MFMWLPFGVA
301: LASARLTVAL TVPYRYSTPI LAATGMSWRL KAGERPPLQT AGVERGCRRG QLFVCNHRTL LDPVYVSVAL DRPVRAVSYS LSRLSELISP IGRTVRLTRD
401: RDADGRAMGR LLESGDLVVV CPEGTTCREP YLLRFSPLFA ELSDDVVPVG VAVETAMFYP TTAGGLKCLD PFFYMVNPRM CYTVQFLERV RTAVVREGKV
501: PSADMANLVQ KKIGDALGYS CTMLTRKDKY LMLAGNDGVV RKVDGKCSSA PAGRTDK

Best Arabidopsis Sequence Match ( AT4G01950.1 )
(BLAST)

001: MSAKISIFQA LVFLFYRFIL RRYRNSKPKY QNGPSSLLQS DLSRHTLIFN VEGALLKSDS LFPYFMLVAF EAGGVIRSFL LFILYPLISL MSHEMGVKVM
101: VMVSFFGIKK EGFRAGRAVL PKYFLEDVGL EMFEVLKRGG KKIGVSDDLP QVMIEGFLRD YLEIDVVVGR EMKVVGGYYL GIMEDKTKHD LVFDELVRKE
201: RLNTGRVIGI TSFNTSLHRY LFSQFCQEIY FVKKSDKRSW QTLPRSQYPK PLIFHDGRLA IKPTLMNTLV LFMWGPFAAA AAAARLFVSL CIPYSLSIPI
301: LAFSGCRLTV TNDYVSSQKQ KPSQRKGCLF VCNHRTLLDP LYVAFALRKK NIKTVTYSLS RVSEILAPIK TVRLTRDRVS DGQAMEKLLT EGDLVVCPEG
401: TTCREPYLLR FSPLFTEVSD VIVPVAVTVH VTFFYGTTAS GLKALDPLFF LLDPYPTYTI QFLDPVSGAT CQDPDGKLKF EVANNVQSDI GKALDFECTS
501: LTRKDKYLIL AGNNGVVKKN

Arabidopsis Description

ATGPAT3glycerol-3-phosphate acyltransferase 3 [Source:TAIR;Acc:AT4G01950]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.