Factsheet for TraesCS5D01G512000.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G361400.1	Wheat	mitochondrion	93.25	94.25
TraesCS5B01G511500.1	Wheat	mitochondrion	93.61	93.27
HORVU5Hr1G116920.5	Barley	mitochondrion	90.23	90.55
Zm00001d034732_P001	Maize	mitochondrion	64.12	67.23
Os03t0832800-02	Rice	mitochondrion	64.3	66.91
Os01t0329000-01	Rice	mitochondrion	65.36	65.13
KXG37209	Sorghum	mitochondrion	64.3	63.62
Bra033323.1-P	Field mustard	endoplasmic reticulum, golgi	38.01	47.03
CDX89973	Canola	endoplasmic reticulum, golgi	37.83	46.81
CDY15240	Canola	endoplasmic reticulum, golgi	37.83	46.81
TraesCS2D01G136700.1	Wheat	mitochondrion	43.87	46.78
Bra036303.1-P	Field mustard	plasma membrane	37.48	46.27
CDY22016	Canola	plasma membrane	37.48	46.27
CDY71692	Canola	golgi, plasma membrane	25.22	46.1
TraesCS5D01G099700.1	Wheat	plasma membrane	43.69	45.9
VIT_07s0005g01760.t01	Wine grape	plasma membrane	42.63	45.89
KRH16642	Soybean	plasma membrane	40.5	45.88
KRH18844	Soybean	plasma membrane	40.85	45.73
CDY07108	Canola	plasma membrane	36.94	45.61
KRH16640	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	40.5	45.15
TraesCS3D01G333200.1	Wheat	mitochondrion	43.16	44.83
KRH68291	Soybean	mitochondrion	40.5	44.79
KRH68289	Soybean	endoplasmic reticulum, plasma membrane	42.1	43.97
KRG96552	Soybean	plasma membrane	41.56	43.33
TraesCS4D01G143600.1	Wheat	mitochondrion	42.27	42.73
TraesCS3D01G155000.1	Wheat	mitochondrion	40.67	42.64
TraesCS4D01G280800.1	Wheat	peroxisome	37.83	42.6
TraesCS7D01G498800.1	Wheat	mitochondrion	38.72	42.41
TraesCS1D01G222100.1	Wheat	mitochondrion, plastid	36.59	42.39
KRH31769	Soybean	golgi	41.56	42.09
AT1G02390.1	Thale cress	plasma membrane	39.61	42.08
KRH69194	Soybean	golgi, plasma membrane, plastid	41.39	41.98
AT4G01950.2	Thale cress	cytosol, golgi, peroxisome	40.32	41.42
TraesCS3D01G225300.1	Wheat	mitochondrion, plasma membrane	39.43	41.42
TraesCS2D01G332900.1	Wheat	mitochondrion, plastid	37.12	41.3
Bra000903.1-P	Field mustard	mitochondrion, plasma membrane	38.01	41.15
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	35.88	39.53
TraesCS1D01G282300.1	Wheat	plasma membrane	36.06	39.34
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	35.35	38.94
TraesCS6D01G043000.1	Wheat	mitochondrion	34.46	38.42
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	32.68	37.02
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	29.84	30.49
TraesCS3D01G225400.1	Wheat	mitochondrion	13.68	29.96

Protein Annotations

EnsemblPlants:TraesCS5D01G512000.1	EnsemblPlantsGene:TraesCS5D01G512000	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	InterPro:Plipid/glycerol_acylTrfase	PANTHER:PTHR15486	PANTHER:PTHR15486:SF18	PFAM:PF01553
SEG:seg	SMART:SM00563	SUPFAM:SSF69593	TIGR:cd06551	MapMan:5.2.1.3.1	:

Description

No Description!

Coordinates

chr5D:+:536409531..536413850

Molecular Weight (calculated)

60569.4 Da

IEP (calculated)

9.737

GRAVY (calculated)

0.127

Length

563 amino acids

Sequence
(BLAST)

001: MSKAFTKSLL LYNKILIRRL KSLISRAPPA PTSATERLPP SQRRESSTAP LDALPAPGTM DNDNNNGGCA GGGAIVCEVE GALLMSSSTF PYFMLVALEA
101: GGLLRGLLLL LLYPLLRLLT DELAMKAMVM VTFAGLRKDA FGRLGMAVMP KLFLQDVSAE VFHAATSAPA TAGAARRRRR CVCVSSMPRV MVESFLKEYL
201: AVDAVVAPEL RELGGYYLGL VEDEGEAMRR MDVEEAIGAK GGAVVGIGGL GCSFRHIFQK YCKEVYVPTE STRRRRGALH PRRYPKPLVF HDGRTAFRPT
301: PAATLAMFVW LPLGAPLAVL RTAVFLLLPF SLSVPLLASL GMHNRMIASS LPSAGDKSKG NLFACNHRSL LDPLCVSAAA GRRDLAAATY SISRLSEMLA
401: PIPTFRLTRD RAADRGAMQA QLARRGGRGG LVVCPEGTTC REPFLLRFSP LFAELAAGGV DVVPVALHLA VDMFHGTTAG GRKMLDPLYL LMNPVPSYLV
501: QFLDPVECGD QEARAVANEV QRRVAEALGY ERTGLTRRDK YLILAGNEGV VGAAASHDGG PKN

Best Arabidopsis Sequence Match ( AT1G02390.1 )
(BLAST)

001: MSGNKISTLQ ALVFFLYRFF ILRRWCHRSP KQKYQKCPSH GLHQYQDLSN HTLIFNVEGA LLKSNSLFPY FMVVAFEAGG VIRSLFLLVL YPFISLMSYE
101: MGLKTMVMLS FFGVKKESFR VGKSVLPKYF LEDVGLEMFQ VLKRGGKRVA VSDLPQVMID VFLRDYLEIE VVVGRDMKMV GGYYLGIVED KKNLEIAFDK
201: VVQEERLGSG RRLIGITSFN SPSHRSLFSQ FCQEIYFVRN SDKKSWQTLP QDQYPKPLIF HDGRLAVKPT PLNTLVLFMW APFAAVLAAA RLVFGLNLPY
301: SLANPFLAFS GIHLTLTVNN HNDLISADRK RGCLFVCNHR TLLDPLYISY ALRKKNMKAV TYSLSRLSEL LAPIKTVRLT RDRVKDGQAM EKLLSQGDLV
401: VCPEGTTCRE PYLLRFSPLF SEVCDVIVPV AIDSHVTFFY GTTASGLKAF DPIFFLLNPF PSYTVKLLDP VSGSSSSTCR GVPDNGKVNF EVANHVQHEI
501: GNALGFECTN LTRRDKYLIL AGNNGVVKKK

Arabidopsis Description

GPAT2Probable glycerol-3-phosphate acyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ22]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.