Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G282100.1 | Wheat | peroxisome | 98.2 | 98.2 |
| TraesCS4A01G021500.1 | Wheat | peroxisome | 97.4 | 97.4 |
| HORVU4Hr1G074470.4 | Barley | plastid | 97.4 | 92.94 |
| Os03t0166600-00 | Rice | cytosol | 39.2 | 78.09 |
| Zm00001d027810_P001 | Maize | cytosol, peroxisome, plasma membrane | 75.6 | 74.7 |
| KXG40111 | Sorghum | cytosol, peroxisome, plasma membrane | 77.2 | 73.66 |
| TraesCS1D01G132800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 72.4 | 70.84 |
| TraesCS4D01G065400.1 | Wheat | plasma membrane, plastid | 67.0 | 65.56 |
| VIT_01s0026g01210.t01 | Wine grape | plasma membrane | 64.4 | 64.02 |
| PGSC0003DMT400073428 | Potato | cytosol | 37.8 | 62.58 |
| PGSC0003DMT400007387 | Potato | plasma membrane | 62.8 | 62.55 |
| KRH33389 | Soybean | plasma membrane | 63.4 | 62.28 |
| Solyc04g005840.1.1 | Tomato | plasma membrane | 62.0 | 62.12 |
| KRG90133 | Soybean | plasma membrane | 63.4 | 61.91 |
| PGSC0003DMT400003553 | Potato | plasma membrane | 59.0 | 61.46 |
| Solyc02g087500.1.1 | Tomato | plasma membrane | 62.2 | 61.22 |
| PGSC0003DMT400028782 | Potato | plasma membrane | 59.2 | 60.04 |
| PGSC0003DMT400091384 | Potato | plasma membrane | 61.0 | 60.04 |
| PGSC0003DMT400028781 | Potato | plasma membrane | 57.0 | 57.69 |
| TraesCS6D01G043000.1 | Wheat | mitochondrion | 56.6 | 56.04 |
| Solyc10g084900.1.1 | Tomato | plasma membrane | 54.4 | 55.97 |
| PGSC0003DMT400028779 | Potato | plasma membrane | 24.8 | 55.36 |
| TraesCS3D01G361300.1 | Wheat | golgi, plastid, unclear | 54.0 | 54.33 |
| PGSC0003DMT400028775 | Potato | plasma membrane | 52.8 | 53.99 |
| TraesCS1D01G282300.1 | Wheat | plasma membrane | 52.0 | 50.39 |
| VIT_14s0066g02150.t01 | Wine grape | golgi, plasma membrane, plastid | 50.0 | 50.1 |
| TraesCS1D01G278000.1 | Wheat | plasma membrane, plastid | 52.4 | 47.55 |
| TraesCS5D01G099700.1 | Wheat | plasma membrane | 45.4 | 42.35 |
| TraesCS7D01G498800.1 | Wheat | mitochondrion | 42.8 | 41.63 |
| TraesCS3D01G225300.1 | Wheat | mitochondrion, plasma membrane | 44.2 | 41.23 |
| TraesCS3D01G333200.1 | Wheat | mitochondrion | 44.2 | 40.77 |
| TraesCS4D01G143600.1 | Wheat | mitochondrion | 44.0 | 39.5 |
| TraesCS1D01G222100.1 | Wheat | mitochondrion, plastid | 37.0 | 38.07 |
| TraesCS2D01G136700.1 | Wheat | mitochondrion | 40.0 | 37.88 |
| TraesCS5D01G512000.1 | Wheat | mitochondrion | 42.6 | 37.83 |
| TraesCS2D01G332900.1 | Wheat | mitochondrion, plastid | 37.8 | 37.35 |
| TraesCS3D01G155000.1 | Wheat | mitochondrion | 39.0 | 36.31 |
| TraesCS3D01G225400.1 | Wheat | mitochondrion | 16.0 | 31.13 |
Protein Annotations
| Gene3D:1.20.1440.100 | MapMan:26.9.3.2 | Gene3D:3.40.50.1000 | MapMan:5.2.1.2.2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016740 | GO:GO:0016746 | InterPro:HAD-like_sf | InterPro:HAD_sf |
| InterPro:IPR023214 | PFAM:PF01553 | PFAM:PF12710 | PANTHER:PTHR15486 | PANTHER:PTHR15486:SF7 | InterPro:Plipid/glycerol_acylTrfase |
| SMART:SM00563 | SUPFAM:SSF56784 | SUPFAM:SSF69593 | EnsemblPlantsGene:TraesCS4D01G280800 | EnsemblPlants:TraesCS4D01G280800.1 | TIGR:cd06551 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:-:451684467..451686476
Molecular Weight (calculated)
54331.8 Da
IEP (calculated)
9.358
GRAVY (calculated)
0.087
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVAIEEPFP AVRKCDASRR GDHTVVSDLD GTLLRSRSAF PYYALVAFET GGVPRLALLL LLAPLAGLLY HAVSESAGVR VLVFAATAGA RVADIESAAR
101: AVLPRFYADD VHPDAWRVFA ACGRRWVVTA TPRVMAEPFL RDHLGADAVA GTELATWRGR ATGLVDSRRG VLVGERKAEA LREMVGDGDA PEVGLGDRRS
201: DYAFMSICKE AYLVPREPVD AVGADKLRKP VVFHDGRLVQ RPTPLAALLA VAWYPIGFLL ACVRVAAGSL VPMPWQYHVY RALGVRVVVR GAPPPRPKHA
301: EGRTGALFAC SHRTLLDPVF ISVALGRPVS VVTYSLSRLS EFLSPIRTVR LTRDRATDAA AIRRLLAGGD LAVCPEGTTC REPFLLRFSS LFAELSDDIV
401: PVATECRMSM FHGTTARGWK GMDPFYLFMN PRPQYTVTFL DRLPAEHTCG GGGRSSHEVA NHVQRLIASA LSFECTGFTR KDKYLALAGN DGVVRPNKGT
101: AVLPRFYADD VHPDAWRVFA ACGRRWVVTA TPRVMAEPFL RDHLGADAVA GTELATWRGR ATGLVDSRRG VLVGERKAEA LREMVGDGDA PEVGLGDRRS
201: DYAFMSICKE AYLVPREPVD AVGADKLRKP VVFHDGRLVQ RPTPLAALLA VAWYPIGFLL ACVRVAAGSL VPMPWQYHVY RALGVRVVVR GAPPPRPKHA
301: EGRTGALFAC SHRTLLDPVF ISVALGRPVS VVTYSLSRLS EFLSPIRTVR LTRDRATDAA AIRRLLAGGD LAVCPEGTTC REPFLLRFSS LFAELSDDIV
401: PVATECRMSM FHGTTARGWK GMDPFYLFMN PRPQYTVTFL DRLPAEHTCG GGGRSSHEVA NHVQRLIASA LSFECTGFTR KDKYLALAGN DGVVRPNKGT
001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME
Arabidopsis Description
GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.