Factsheet for Solyc02g087500.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
golgi 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
MultiLoc:	golgi
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003553	Potato	plasma membrane	91.14	96.46
PGSC0003DMT400091384	Potato	plasma membrane	96.46	96.46
PGSC0003DMT400073428	Potato	cytosol	57.09	96.03
Solyc04g005840.1.1	Tomato	plasma membrane	77.36	78.76
EER90914	Sorghum	plasma membrane	72.05	72.48
Zm00001d033915_P001	Maize	plasma membrane	71.65	71.23
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	70.47	70.06
TraesCS4A01G248400.1	Wheat	plasma membrane	70.28	69.73
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	70.47	67.42
Solyc10g084900.1.1	Tomato	plasma membrane	62.99	65.84
TraesCS4B01G066500.1	Wheat	plasma membrane	70.08	65.32
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	66.54	64.88
EER91628	Sorghum	cytosol	66.14	64.86
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	50.98	64.59
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	64.57	64.19
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	64.17	63.8
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	64.17	63.8
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	63.78	63.41
TraesCS4D01G280800.1	Wheat	peroxisome	61.22	62.2
TraesCS4B01G282100.1	Wheat	peroxisome	61.22	62.2
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	60.43	61.52
TraesCS4A01G021500.1	Wheat	peroxisome	60.43	61.4
HORVU4Hr1G074470.4	Barley	plastid	61.61	59.73
HORVU1Hr1G032150.4	Barley	peroxisome	62.99	59.26
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	58.66	58.89
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	59.45	57.63
HORVU4Hr1G011110.4	Barley	plastid	70.47	57.37
TraesCS2A01G015700.1	Wheat	mitochondrion	63.19	55.25
Solyc09g014350.2.1	Tomato	cytosol	53.54	53.97
Os10t0413400-00	Rice	plastid	65.16	53.65
Os03t0166600-00	Rice	cytosol	25.79	52.19
Solyc04g011600.2.1	Tomato	plasma membrane	50.2	51.93
Solyc01g094700.2.1	Tomato	plasma membrane	49.41	50.1
Solyc05g053030.1.1	Tomato	plasma membrane	46.06	46.61
Solyc07g056320.2.1	Tomato	plasma membrane	49.8	46.34
GSMUA_Achr5P14930_001	Banana	plasma membrane	60.04	41.67

Protein Annotations

MapMan:26.9.3.2	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010143	GO:GO:0016020
GO:GO:0016021	GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	GO:GO:0016787	GO:GO:0016791
GO:GO:0090447	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:K4BBQ7	PFAM:PF01553
PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF56784
SUPFAM:SSF69593	EnsemblPlantsGene:Solyc02g087500.1	EnsemblPlants:Solyc02g087500.1.1	TMHMM:TMhelix	UniParc:UPI0002768109	:

Description

No Description!

Coordinates

chr2:-:49922842..49925140

Molecular Weight (calculated)

56376.4 Da

IEP (calculated)

9.631

GRAVY (calculated)

0.130

Length

508 amino acids

Sequence
(BLAST)

001: MAKKDSKKFP TIQQCESKGR EDQTVVADMD GTLLVGRSSF PYFALVAFEV GGISRLIFLI LASPLAGFLY YFISESAGIR VLVFATFFGM KVSDIESVAR
101: AVLPKFYSSD LHPETWRVFS SCGKRCVLTA NPRVMVEPFL KEYLSVDIVI GTEICTYKGR ATGFVNECGV LVGNNKAKAL LKAFGSKFAP HIGLGDRKTD
201: FPFMNLCKES YIVPREPDVK PMGQDKLPKP IVFHDGRLVQ KPSPLMALMI ILWIPVGFLL ACLRIAAGAL LPMPLVYYAF WTLGVRVIIK GNPPLPARKS
301: TGRTGVLFIC SHRTLLDPIF LSTALGRPIP AVTYSLSRLS EIISPIKTVR LSRDRITDAN MIKKLLQEGD LVICPEGTTC REPFLLRFSA LFAELTNELV
401: PVAMCNKMSM FHGTTARGWK GMDPFYFFMN PSPSYEVNFL NKWPHELTCK AGKSSHDVAN YIQRTIAATL SYECTNFTRK DKYMALAGND GTVTTKSEFA
501: SKKVTTGC

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.