Factsheet for PGSC0003DMT400003553

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400073428	Potato	cytosol	62.5	99.34
PGSC0003DMT400091384	Potato	plasma membrane	100.0	94.49
Solyc02g087500.1.1	Tomato	plasma membrane	96.46	91.14
PGSC0003DMT400007387	Potato	plasma membrane	79.58	76.1
PGSC0003DMT400028782	Potato	plasma membrane	72.5	70.59
EER90914	Sorghum	plasma membrane	73.54	69.9
Zm00001d033915_P001	Maize	plasma membrane	73.12	68.69
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	72.29	67.91
PGSC0003DMT400028781	Potato	plasma membrane	69.79	67.81
TraesCS4A01G248400.1	Wheat	plasma membrane	71.88	67.38
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	72.08	65.16
PGSC0003DMT400028779	Potato	plasma membrane	30.21	64.73
PGSC0003DMT400028775	Potato	plasma membrane	64.58	63.39
TraesCS4B01G066500.1	Wheat	plasma membrane	71.88	63.3
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	52.08	62.34
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	66.04	62.04
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	67.29	62.0
EER91628	Sorghum	cytosol	66.88	61.97
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	65.83	61.84
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	65.83	61.84
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	65.42	61.45
TraesCS4D01G280800.1	Wheat	peroxisome	61.46	59.0
TraesCS4B01G282100.1	Wheat	peroxisome	61.46	59.0
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	61.04	58.72
TraesCS4A01G021500.1	Wheat	peroxisome	60.62	58.2
HORVU1Hr1G032150.4	Barley	peroxisome	64.58	57.41
HORVU4Hr1G074470.4	Barley	plastid	61.88	56.68
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	59.17	56.13
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	60.83	55.73
HORVU4Hr1G011110.4	Barley	plastid	72.08	55.45
PGSC0003DMT400016230	Potato	golgi, mitochondrion, plasma membrane	45.0	54.55
TraesCS2A01G015700.1	Wheat	mitochondrion	65.83	54.39
PGSC0003DMT400052335	Potato	cytosol	56.04	53.16
Os10t0413400-00	Rice	plastid	65.62	51.05
PGSC0003DMT400000152	Potato	plasma membrane	50.83	48.7
Os03t0166600-00	Rice	cytosol	24.58	47.01
PGSC0003DMT400044571	Potato	plasma membrane	50.62	44.67
GSMUA_Achr5P14930_001	Banana	plasma membrane	60.62	39.75
PGSC0003DMT400069796	Potato	plasma membrane	46.04	29.59

Protein Annotations

EntrezGene:102593080	EntrezGene:102606136	MapMan:26.9.3.2	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M0ZLW8
PFAM:PF01553	PFAM:PF12710	EnsemblPlantsGene:PGSC0003DMG400001404	PGSC:PGSC0003DMG400001404	EnsemblPlants:PGSC0003DMT400003553	PANTHER:PTHR15486
PANTHER:PTHR15486:SF7	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix
UniParc:UPI000294BDD0	RefSeq:XP_006338785.2	RefSeq:XP_006361145.2	:	:	:

Description

ER glycerol-phosphate acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400001404]

Coordinates

chr2:+:46555738..46558076

Molecular Weight (calculated)

53050.3 Da

IEP (calculated)

9.620

GRAVY (calculated)

0.186

Length

480 amino acids

Sequence
(BLAST)

001: MDGTLLVGRS SFPYFALVAF EVGGISRLIF LILASPLAGF LYYFISESAG IRVLVFATFV GMKVSDIESV ARAVLPKFYS SDLHPETWRV FSSCGKRCVL
101: TANPRIMVEP VLKEYLSVDI VIGTEICTYK GRATGFVNES GVLVGDNKAK ALQKAFGSKF TPHIGLGDRK TDFPFMNLCK ESYIVPPEPG VKPMSQDKLP
201: KPIVFHDGRL VQKPSPLMAL IIILWIPVGF LLACLRIAAG TLLPMPLVYY AFWSLGVRVI IKGNPPPPAR KSTGQTGVLF ISSHRTLLDP IFLSTALGRP
301: IPAVTYSLSR LSEIISPIKT VRLSRDRITD ANMIKKLLQE GDLVICPEGT TCREPFLLRF SALFAELTNE LVPVAMCNKM SMFHGTTARG WKGMDPFYFF
401: MNPSPSYEVN FLNKWPYELT CKAGKSSHDV ANYIQRTIAA TLSYECTNFT RKDKYMALAG NDGTVTTKSE FASKKVTTGC

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.