Factsheet for PGSC0003DMT400052335

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, mitochondrion
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g014350.2.1	Tomato	cytosol	97.43	97.82
VIT_08s0007g02000.t01	Wine grape	golgi	80.24	81.36
KRH49307	Soybean	plasma membrane	77.47	79.03
KRH55439	Soybean	plasma membrane	43.28	78.78
KRH75836	Soybean	cytosol, plasma membrane, plastid	75.69	77.85
KRH66036	Soybean	plasma membrane	75.89	77.11
AT2G38110.1	Thale cress	cytosol, golgi, plasma membrane	75.49	76.25
KRG88817	Soybean	plasma membrane	42.09	75.53
Bra005137.1-P	Field mustard	peroxisome	74.31	75.05
CDY64226	Canola	peroxisome	74.11	74.85
Bra017137.1-P	Field mustard	cytosol, golgi, peroxisome	74.11	74.85
CDX93327	Canola	golgi, peroxisome, plasma membrane	73.91	74.65
CDX74912	Canola	peroxisome	73.91	74.65
CDY69719	Canola	cytosol, golgi, peroxisome	62.85	74.47
KRH00171	Soybean	plastid	77.27	72.54
Os01t0855000-01	Rice	cytosol, peroxisome, plasma membrane	70.36	71.63
EES03906	Sorghum	golgi, peroxisome, plasma membrane	70.36	70.78
Zm00001d042813_P001	Maize	plastid	65.81	70.7
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	60.47	68.61
HORVU3Hr1G084990.1	Barley	plasma membrane	67.19	68.41
TraesCS3A01G368400.1	Wheat	cytosol, peroxisome, plasma membrane	67.19	68.41
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	67.0	68.21
TraesCS3B01G400000.1	Wheat	golgi	67.0	68.21
GSMUA_Achr10P...	Banana	plasma membrane	55.73	65.13
GSMUA_Achr10P...	Banana	plasma membrane	60.28	61.0
HORVU1Hr1G073340.2	Barley	plasma membrane	59.29	60.0
PGSC0003DMT400000152	Potato	plasma membrane	59.09	59.68
PGSC0003DMT400007387	Potato	plasma membrane	57.91	58.37
Os05t0448300-01	Rice	plasma membrane	54.15	56.38
Zm00001d010078_P001	Maize	plasma membrane	54.15	56.38
TraesCS1B01G287900.1	Wheat	golgi, peroxisome, plasma membrane	57.11	56.34
PGSC0003DMT400003553	Potato	plasma membrane	53.16	56.04
PGSC0003DMT400028782	Potato	plasma membrane	54.15	55.58
PGSC0003DMT400073428	Potato	cytosol	32.81	54.97
KXG22121	Sorghum	endoplasmic reticulum, golgi, plasma membrane	54.94	54.51
PGSC0003DMT400091384	Potato	plasma membrane	54.55	54.33
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	59.09	54.27
PGSC0003DMT400028781	Potato	plasma membrane	52.96	54.25
TraesCS1A01G278700.1	Wheat	plastid	58.1	53.75
PGSC0003DMT400028779	Potato	plasma membrane	23.52	53.12
PGSC0003DMT400016230	Potato	golgi, mitochondrion, plasma membrane	41.5	53.03
PGSC0003DMT400028775	Potato	plasma membrane	49.21	50.92
PGSC0003DMT400044571	Potato	plasma membrane	48.42	45.04
PGSC0003DMT400069796	Potato	plasma membrane	43.87	29.72

Protein Annotations

EntrezGene:102603688	MapMan:21.9.1.5.1	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	UniProt:M1BT72	PFAM:PF01553	PFAM:PF12710	EnsemblPlantsGene:PGSC0003DMG400020315	PGSC:PGSC0003DMG400020315
EnsemblPlants:PGSC0003DMT400052335	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF56784
SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI000296D6CB	RefSeq:XP_006363045.1	SEG:seg	:

Description

Glycerol-3-phosphate acyltransferase 6 [Source:PGSC_GENE;Acc:PGSC0003DMG400020315]

Coordinates

chr9:+:311573..314993

Molecular Weight (calculated)

56848.1 Da

IEP (calculated)

9.757

GRAVY (calculated)

0.100

Length

506 amino acids

Sequence
(BLAST)

001: MGALPHFEPI SKYNKEINRS NQTIASDLDG TLLISTSSFP YFFLIALEAG SLIRALLLLL FVPIIYFIYI FISESIAIET LIFISFAGLK IKDIEIVSRA
101: VLPKFYSEDV HPHTWKVFNS FGKRYIVTAN PRIMVEHFAK TFLGVDKVLG TELHVSKSGR ATGFVTKPGV LVGQYKRDAL IKEFGTNVPH VGLGDRDTDR
201: DFISICKEGY MVPRSKIEPL ARNKLLSPVI FHEGRFVQRP TPLMALLTFL WMPIGIILSI LRVYLNIPLP EKIVRYNYII LGIKLIVKGT PPPPPKNGQR
301: GVLFVCNHRT ILDPVVTAVA LGRKISCVTY SISKFSEMIS PIKAVALSRE REKDAAHIKQ LLEEGDLVIC PEGTTCREPF LLRFSALFAE LTDRIVPVAI
401: NTKQSVFNGT TVRGYKLLDP YFVFMNPRPT YEITFLNQLP PELNCTNGGK SAIEVANYIQ KVLGGTLGFE CTNLTRRDKY AILAGTDGRV AIKDKEKEKE
501: KEKEKM

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.