Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH66036 | Soybean | plasma membrane | 94.51 | 93.37 |
| KRH49307 | Soybean | plasma membrane | 85.57 | 84.88 |
| KRH55439 | Soybean | plasma membrane | 47.56 | 84.17 |
| KRG88817 | Soybean | plasma membrane | 46.75 | 81.56 |
| VIT_08s0007g02000.t01 | Wine grape | golgi | 81.1 | 79.96 |
| Bra017137.1-P | Field mustard | cytosol, golgi, peroxisome | 80.08 | 78.64 |
| CDY69719 | Canola | cytosol, golgi, peroxisome | 68.09 | 78.45 |
| AT2G38110.1 | Thale cress | cytosol, golgi, plasma membrane | 79.88 | 78.44 |
| KRH00171 | Soybean | plastid | 85.37 | 77.92 |
| CDX93327 | Canola | golgi, peroxisome, plasma membrane | 78.86 | 77.45 |
| Bra005137.1-P | Field mustard | peroxisome | 78.66 | 77.25 |
| CDY64226 | Canola | peroxisome | 78.66 | 77.25 |
| CDX74912 | Canola | peroxisome | 78.46 | 77.05 |
| PGSC0003DMT400052335 | Potato | cytosol | 77.85 | 75.69 |
| Solyc09g014350.2.1 | Tomato | cytosol | 77.03 | 75.2 |
| Zm00001d042813_P001 | Maize | plastid | 68.7 | 71.76 |
| Os01t0855000-01 | Rice | cytosol, peroxisome, plasma membrane | 71.95 | 71.23 |
| EES03906 | Sorghum | golgi, peroxisome, plasma membrane | 72.15 | 70.58 |
| TraesCS3A01G368400.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.51 | 68.81 |
| HORVU3Hr1G084990.1 | Barley | plasma membrane | 68.9 | 68.21 |
| TraesCS3D01G361300.1 | Wheat | golgi, plastid, unclear | 68.9 | 68.21 |
| TraesCS3B01G400000.1 | Wheat | golgi | 68.9 | 68.21 |
| GSMUA_Achr3P17610_001 | Banana | cytosol, golgi, plasma membrane | 61.38 | 67.71 |
| GSMUA_Achr10P... | Banana | plasma membrane | 58.13 | 66.05 |
| HORVU1Hr1G073340.2 | Barley | plasma membrane | 63.82 | 62.8 |
| KRH48117 | Soybean | plasma membrane | 61.99 | 61.12 |
| KRH64978 | Soybean | plasma membrane | 61.18 | 60.2 |
| Os05t0448300-01 | Rice | plasma membrane | 59.35 | 60.08 |
| GSMUA_Achr10P... | Banana | plasma membrane | 60.98 | 60.0 |
| TraesCS1B01G287900.1 | Wheat | golgi, peroxisome, plasma membrane | 61.38 | 58.87 |
| Zm00001d010078_P001 | Maize | plasma membrane | 57.93 | 58.64 |
| KXG22121 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 59.96 | 57.84 |
| TraesCS1A01G278700.1 | Wheat | plastid | 62.4 | 56.12 |
| TraesCS1D01G278000.1 | Wheat | plasma membrane, plastid | 62.8 | 56.08 |
| KRH33389 | Soybean | plasma membrane | 57.11 | 55.21 |
| KRG90133 | Soybean | plasma membrane | 56.91 | 54.69 |
| KRH73056 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 47.15 | 49.15 |
| KRH15081 | Soybean | cytosol | 46.95 | 48.94 |
| KRH73656 | Soybean | plasma membrane | 46.95 | 42.86 |
| KRH14479 | Soybean | plasma membrane | 46.34 | 42.22 |
| KRG98920 | Soybean | mitochondrion | 44.72 | 41.75 |
| KRH46052 | Soybean | mitochondrion, plasma membrane | 44.72 | 41.28 |
| KRH16640 | Soybean | endoplasmic reticulum, golgi, plasma membrane, plastid | 40.85 | 39.8 |
| KRH18844 | Soybean | plasma membrane | 39.84 | 38.97 |
| KRH16642 | Soybean | plasma membrane | 38.82 | 38.43 |
| KRH68291 | Soybean | mitochondrion | 39.23 | 37.92 |
| KRH68289 | Soybean | endoplasmic reticulum, plasma membrane | 38.82 | 35.44 |
| KRG96552 | Soybean | plasma membrane | 37.8 | 34.44 |
| KRH69194 | Soybean | golgi, plasma membrane, plastid | 38.82 | 34.41 |
| KRH31769 | Soybean | golgi | 38.01 | 33.63 |
Protein Annotations
| Gene3D:1.20.1440.100 | EntrezGene:100817242 | MapMan:21.9.1.5.1 | Gene3D:3.40.50.1000 | MapMan:5.2.1.2.2 | EMBL:ACUP02000503 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_01G113200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010143 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016311 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016787 | GO:GO:0016791 | GO:GO:0090447 |
| InterPro:HAD-like_sf | InterPro:HAD_sf | UniProt:I1J788 | InterPro:IPR023214 | EnsemblPlants:KRH75836 | ProteinID:KRH75836 |
| ProteinID:KRH75836.1 | PFAM:PF01553 | PFAM:PF12710 | PANTHER:PTHR15486 | PANTHER:PTHR15486:SF27 | InterPro:Plipid/glycerol_acylTrfase |
| SMART:SM00563 | SUPFAM:SSF56784 | SUPFAM:SSF69593 | TMHMM:TMhelix | UniParc:UPI00023BDACB | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:-:38754836..38758727
Molecular Weight (calculated)
54374.1 Da
IEP (calculated)
9.461
GRAVY (calculated)
0.243
Length
492 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTFPRFDPI TTQDRSNQTV ASDLDGTLLV SRSAFPYYLL VALEAGSVLR ALLLLTSAPF VYFTYLVLSE TLAIKTLIFI TFAGLKLKDV ELVSRSVLPR
101: FYAEDVHPAT WRIFNAFGGR RCIVTASPRV MVEPFAKTFL GADTVLGTEL AVTASGRVTG FAKEPGVLVG VQKKEVVLKE FGSNLPDLGL GDSVTDMDFM
201: SICKEGYMVP RIKCEPLPRN KLLSPIIFHE GRLVQRPTPL VALLTFLWMP IGIILSILRV YLNIPLPERL AWYNYKLLGI RVIRKGTPPP PPKKGQSGVL
301: FVCNHRTVLD PVVTAVALGR KISCVTYSIS KFTEIISPIK AVALSREREK DAANIKKLLE EGDLVICPEG TTCREQFLLR FSALFAELTD RIVPVAINTK
401: QSVFYGTSVR GHKLLDPYFV FMNPMPTYEI TFLNQLPTEL TCMGGKSAIE VANYIQRVLA GTLGFECTNL TRKDKYAILA GTDGTVPSMK SA
101: FYAEDVHPAT WRIFNAFGGR RCIVTASPRV MVEPFAKTFL GADTVLGTEL AVTASGRVTG FAKEPGVLVG VQKKEVVLKE FGSNLPDLGL GDSVTDMDFM
201: SICKEGYMVP RIKCEPLPRN KLLSPIIFHE GRLVQRPTPL VALLTFLWMP IGIILSILRV YLNIPLPERL AWYNYKLLGI RVIRKGTPPP PPKKGQSGVL
301: FVCNHRTVLD PVVTAVALGR KISCVTYSIS KFTEIISPIK AVALSREREK DAANIKKLLE EGDLVICPEG TTCREQFLLR FSALFAELTD RIVPVAINTK
401: QSVFYGTSVR GHKLLDPYFV FMNPMPTYEI TFLNQLPTEL TCMGGKSAIE VANYIQRVLA GTLGFECTNL TRKDKYAILA GTDGTVPSMK SA
001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T
Arabidopsis Description
GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.