Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- peroxisome 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74912 | Canola | peroxisome | 99.4 | 99.4 |
| Bra005137.1-P | Field mustard | peroxisome | 99.2 | 99.2 |
| CDX93327 | Canola | golgi, peroxisome, plasma membrane | 94.41 | 94.41 |
| CDY69719 | Canola | cytosol, golgi, peroxisome | 80.24 | 94.15 |
| AT2G38110.1 | Thale cress | cytosol, golgi, plasma membrane | 92.42 | 92.42 |
| VIT_08s0007g02000.t01 | Wine grape | golgi | 79.44 | 79.76 |
| KRH75836 | Soybean | cytosol, plasma membrane, plastid | 77.25 | 78.66 |
| KRH49307 | Soybean | plasma membrane | 77.45 | 78.23 |
| KRH66036 | Soybean | plasma membrane | 75.85 | 76.31 |
| PGSC0003DMT400052335 | Potato | cytosol | 74.85 | 74.11 |
| KRH55439 | Soybean | plasma membrane | 40.92 | 73.74 |
| Solyc09g014350.2.1 | Tomato | cytosol | 74.05 | 73.61 |
| KRH00171 | Soybean | plastid | 77.64 | 72.17 |
| KRG88817 | Soybean | plasma membrane | 40.32 | 71.63 |
| Zm00001d042813_P001 | Maize | plastid | 67.27 | 71.55 |
| Os01t0855000-01 | Rice | cytosol, peroxisome, plasma membrane | 70.26 | 70.83 |
| EES03906 | Sorghum | golgi, peroxisome, plasma membrane | 70.46 | 70.18 |
| GSMUA_Achr3P17610_001 | Banana | cytosol, golgi, plasma membrane | 61.48 | 69.06 |
| GSMUA_Achr10P... | Banana | plasma membrane | 58.88 | 68.13 |
| TraesCS3A01G368400.1 | Wheat | cytosol, peroxisome, plasma membrane | 66.87 | 67.4 |
| HORVU3Hr1G084990.1 | Barley | plasma membrane | 66.87 | 67.4 |
| TraesCS3B01G400000.1 | Wheat | golgi | 66.67 | 67.2 |
| TraesCS3D01G361300.1 | Wheat | golgi, plastid, unclear | 66.67 | 67.2 |
| CDY71876 | Canola | cytosol, extracellular, mitochondrion | 20.56 | 62.8 |
| HORVU1Hr1G073340.2 | Barley | plasma membrane | 62.08 | 62.2 |
| CDX90045 | Canola | plasma membrane | 61.68 | 61.43 |
| CDY15166 | Canola | plasma membrane | 61.68 | 61.43 |
| CDY38016 | Canola | plasma membrane | 61.68 | 61.19 |
| CDY22002 | Canola | mitochondrion | 26.95 | 61.09 |
| GSMUA_Achr10P... | Banana | plasma membrane | 60.88 | 61.0 |
| CDY56375 | Canola | mitochondrion | 26.75 | 60.36 |
| Zm00001d010078_P001 | Maize | plasma membrane | 58.48 | 60.29 |
| Os05t0448300-01 | Rice | plasma membrane | 58.48 | 60.29 |
| KXG22121 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 60.28 | 59.22 |
| TraesCS1B01G287900.1 | Wheat | golgi, peroxisome, plasma membrane | 59.08 | 57.7 |
| TraesCS1A01G278700.1 | Wheat | plastid | 62.08 | 56.86 |
| TraesCS1D01G278000.1 | Wheat | plasma membrane, plastid | 62.08 | 56.44 |
| CDY71660 | Canola | cytosol, plasma membrane | 28.34 | 51.45 |
| CDY56848 | Canola | plasma membrane | 39.52 | 48.65 |
| CDY08476 | Canola | cytosol | 11.98 | 48.0 |
| CDY08528 | Canola | cytosol | 38.72 | 47.9 |
| CDY66042 | Canola | plasma membrane | 37.33 | 45.83 |
| CDY01076 | Canola | extracellular, plasma membrane | 17.96 | 44.55 |
| CDY08475 | Canola | plasma membrane | 36.53 | 41.69 |
| CDY71692 | Canola | golgi, plasma membrane | 25.15 | 40.91 |
| CDX98902 | Canola | plasma membrane | 45.31 | 40.75 |
| CDY60435 | Canola | plasma membrane | 45.31 | 40.11 |
| CDY06647 | Canola | plasma membrane | 43.71 | 38.35 |
| CDY10206 | Canola | plasma membrane | 43.31 | 38.27 |
| CDX89973 | Canola | endoplasmic reticulum, golgi | 34.73 | 38.24 |
| CDY15240 | Canola | endoplasmic reticulum, golgi | 34.53 | 38.02 |
| CDY22016 | Canola | plasma membrane | 33.13 | 36.4 |
| CDY07108 | Canola | plasma membrane | 32.73 | 35.96 |
| CDY01075 | Canola | cytosol, plasma membrane, plastid | 10.38 | 33.12 |
Protein Annotations
| MapMan:21.9.1.5.1 | Gene3D:3.40.50.1000 | MapMan:5.2.1.2.2 | GO:A0A078JD98 | UniProt:A0A078JD98 | EnsemblPlants:CDY64226 |
| ProteinID:CDY64226 | ProteinID:CDY64226.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0102419 |
| EnsemblPlantsGene:GSBRNA2T00041007001 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 | PFAM:PF01553 | PFAM:PF12710 |
| PANTHER:PTHR15486 | PANTHER:PTHR15486:SF27 | InterPro:Plipid/glycerol_acylTrfase | SMART:SM00563 | SUPFAM:SSF56784 | SUPFAM:SSF69593 |
| TMHMM:TMhelix | UniParc:UPI0004EEB772 | SEG:seg | : | : | : |
Description
BnaCnng43470DBnaCnng43470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JD98]
Coordinates
chrLK034423:-:15905..18625
Molecular Weight (calculated)
56042.0 Da
IEP (calculated)
9.999
GRAVY (calculated)
0.076
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAHEKRRRF EPISSYEIKD RSNQTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LASVPFVYLT YLSISETLAI NVFIFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDSWSIF NTFGKRYIVT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFVRRP GVLVGQHKRD AVLREFGGVA SSLPDLGLGD
201: SKTDHDFMTI CKEGYMVPRT KCEPLPRNKL LSTIIFHEGR LVQRPTPFVA LLTLLWLPIG FLVSLIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVVLGRKI SCVTYSISKF SELISPIKTV ALTRQRDKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS AMFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPIPTFEITF LKQLPAELTC KGGKSPIEVA NYIQRVLAGT LGFECTNFTR KDKYAMLAGT DGRVPMKKEK
501: I
101: RSVLPRFYAE DVRPDSWSIF NTFGKRYIVT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFVRRP GVLVGQHKRD AVLREFGGVA SSLPDLGLGD
201: SKTDHDFMTI CKEGYMVPRT KCEPLPRNKL LSTIIFHEGR LVQRPTPFVA LLTLLWLPIG FLVSLIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVVLGRKI SCVTYSISKF SELISPIKTV ALTRQRDKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS AMFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPIPTFEITF LKQLPAELTC KGGKSPIEVA NYIQRVLAGT LGFECTNFTR KDKYAMLAGT DGRVPMKKEK
501: I
001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T
Arabidopsis Description
GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.