CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032643.1-P	Field mustard	plasma membrane	97.82	98.6
CDY15166	Canola	plasma membrane	97.23	97.61
CDX90045	Canola	plasma membrane	96.63	97.02
AT1G01610.1	Thale cress	plasma membrane	95.45	95.83
CDY71876	Canola	cytosol, extracellular, mitochondrion	30.3	93.29
KRH48117	Soybean	plasma membrane	81.39	82.36
KRH64978	Soybean	plasma membrane	80.0	80.8
VIT_15s0046g02400.t01	Wine grape	plasma membrane	79.6	80.24
Solyc01g094700.2.1	Tomato	plasma membrane	77.82	78.44
PGSC0003DMT400000152	Potato	plasma membrane	77.82	78.44
CDY69719	Canola	cytosol, golgi, peroxisome	53.66	63.47
CDX93327	Canola	golgi, peroxisome, plasma membrane	62.38	62.87
GSMUA_Achr1P06780_001	Banana	plasma membrane	50.3	61.95
CDX74912	Canola	peroxisome	61.19	61.68
CDY64226	Canola	peroxisome	61.19	61.68
TraesCS6D01G043000.1	Wheat	mitochondrion	55.05	55.05
EES04353	Sorghum	plastid	56.44	55.02
TraesCS6B01G051800.1	Wheat	mitochondrion	54.46	54.24
TraesCS6A01G037400.1	Wheat	endoplasmic reticulum	54.06	53.85
Zm00001d014984_P001	Maize	endoplasmic reticulum	54.26	53.2
TraesCS6B01G052300.1	Wheat	mitochondrion	53.07	52.76
Os02t0114400-00	Rice	mitochondrion	21.98	48.68
CDY56848	Canola	plasma membrane	38.42	47.67
CDY71660	Canola	cytosol, plasma membrane	25.94	47.46
CDY08528	Canola	cytosol	37.62	46.91
CDY08476	Canola	cytosol	11.49	46.4
CDY22002	Canola	mitochondrion	20.2	46.15
CDY01076	Canola	extracellular, plasma membrane	18.42	46.04
CDY56375	Canola	mitochondrion	20.2	45.95
CDY71692	Canola	golgi, plasma membrane	27.33	44.81
CDY66042	Canola	plasma membrane	35.64	44.12
HORVU6Hr1G006810.7	Barley	mitochondrion	53.86	43.38
CDY08475	Canola	plasma membrane	36.04	41.46
CDX89973	Canola	endoplasmic reticulum, golgi	37.03	41.1
CDX98902	Canola	plasma membrane	45.15	40.93
CDY60435	Canola	plasma membrane	45.54	40.64
CDY22016	Canola	plasma membrane	36.63	40.57
CDY15240	Canola	endoplasmic reticulum, golgi	36.44	40.44
CDY07108	Canola	plasma membrane	36.24	40.13
CDY10206	Canola	plasma membrane	42.18	37.57
CDY06647	Canola	plasma membrane	42.18	37.3
CDY01075	Canola	cytosol, plasma membrane, plastid	9.5	30.57

Protein Annotations

MapMan:21.9.1.5.1	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	ProteinID:AFH02724.1	EnsemblPlants:CDY38016	ProteinID:CDY38016
ProteinID:CDY38016.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	EnsemblPlantsGene:GSBRNA2T00065074001	GO:H9XTI4
UniProt:H9XTI4	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486
PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI00025A1169
SEG:seg	:	:	:	:	:

Description

BnaCnng08770DBnaCnng08770D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:H9XTI4]

Coordinates

chrLK032414:-:115889..118595

Molecular Weight (calculated)

56372.4 Da

IEP (calculated)

9.464

GRAVY (calculated)

0.065

Length

505 amino acids

Sequence
(BLAST)

001: MSPAKKKSTS FPPISECKSG EYDSIAADLD GTLLLSRSSF PYFMLVAIEA GSLFRGLILL LSLPIVIIAY LFVSEALGIQ ILIYISFAGI KIRDIELVSR
101: AVLPRFYAAD VRKDSFEVFD KCKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDES PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIERLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSIFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GTPGNLYVLN HRTALDPIII AIALGRKISC VTYSVSRLSR MLSPIPAVAL TRDRAADAAR MRKLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPIEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESIKKTK
501: DDKSS

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.