CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71876	Canola	cytosol, extracellular, mitochondrion	35.2	26.83
CDY71660	Canola	cytosol, plasma membrane	48.8	22.1
CDY01076	Canola	extracellular, plasma membrane	26.4	16.34
CDY08475	Canola	plasma membrane	56.0	15.95
CDY08528	Canola	cytosol	51.2	15.8
CDY56848	Canola	plasma membrane	50.4	15.48
CDY66042	Canola	plasma membrane	49.6	15.2
CDY71692	Canola	golgi, plasma membrane	30.4	12.34
CDX93327	Canola	golgi, peroxisome, plasma membrane	48.8	12.18
CDX74912	Canola	peroxisome	48.0	11.98
CDY64226	Canola	peroxisome	48.0	11.98
CDY15166	Canola	plasma membrane	47.2	11.73
CDX90045	Canola	plasma membrane	47.2	11.73
CDX98902	Canola	plasma membrane	52.0	11.67
CDY38016	Canola	plasma membrane	46.4	11.49
CDY60435	Canola	plasma membrane	52.0	11.48
CDX89973	Canola	endoplasmic reticulum, golgi	36.0	9.89
CDY22016	Canola	plasma membrane	36.0	9.87
CDY15240	Canola	endoplasmic reticulum, golgi	34.4	9.45
CDY07108	Canola	plasma membrane	34.4	9.43
CDY10206	Canola	plasma membrane	40.8	8.99
CDY06647	Canola	plasma membrane	40.8	8.93
CDY69719	Canola	cytosol, golgi, peroxisome	28.8	8.43
CDY22002	Canola	mitochondrion	6.4	3.62
CDY56375	Canola	mitochondrion	6.4	3.6
CDY01075	Canola	cytosol, plasma membrane, plastid	2.4	1.91

Protein Annotations

EnsemblPlants:CDY08476	EnsemblPlantsGene:GSBRNA2T00000244001	PANTHER:PTHR15486	PANTHER:PTHR15486:SF25	ProteinID:CDY08476	ProteinID:CDY08476.1
UniParc:UPI0004EDCC12	UniProt:A0A078F4Z0	MapMan:35.1	:	:	:

Description

BnaA05g27120DBnaA05g27120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F4Z0]

Coordinates

chrLK031986:-:328917..330378

Molecular Weight (calculated)

14359.3 Da

IEP (calculated)

8.645

GRAVY (calculated)

-0.102

Length

125 amino acids

Sequence
(BLAST)

001: MIQSGAVQKS LEKNIQSHRS CLCVLEGRIL KHVPRSWDDS NSRLRFSAMF AELTDRIVPV AVNCRFGFFQ RPLRSWNGLY LIFLFMNPTL EYEITFLNQL
101: PLEATCSSGN SPYDVANHAK YNILT

Best Arabidopsis Sequence Match ( AT3G11430.1 )
(BLAST)

001: MVMEQAGTTS YSVVSEFEGT ILKNADSFSY FMLVAFEAAG LIRFAILLFL WPVITLLDVF SYKNAALKLK IFVATVGLRE PEIESVARAV LPKFYMDDVS
101: MDTWRVFSSC KKRVVVTRMP RVMVERFAKE HLRADEVIGT ELIVNRFGFV TGLIRETDVD QSALNRVANL FVGRRPQLGL GKPALTASTN FLSLCEEHIH
201: APIPENYNHG DQQLQLRPLP VIFHDGRLVK RPTPATALII LLWIPFGIIL AVIRIFLGAV LPLWATPYVS QIFGGHIIVK GKPPQPPAAG KSGVLFVCTH
301: RTLMDPVVLS YVLGRSIPAV TYSISRLSEI LSPIPTVRLT RIRDVDAAKI KQQLSKGDLV VCPEGTTCRE PFLLRFSALF AELTDRIVPV AMNYRVGFFH
401: ATTARGWKGL DPIFFFMNPR PVYEITFLNQ LPMEATCSSG KSPHDVANYV QRILAATLGF ECTNFTRKDK YRVLAGNDGT VSYLSLLDQL KKVVSTFEPC
501: LH

Arabidopsis Description

GPAT5Glycerol-3-phosphate acyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAY3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.