Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60435 Canola plasma membrane 98.38 96.82
AT5G06090.1 Thale cress plasma membrane 79.53 88.6
CDY56848 Canola plasma membrane 57.27 78.38
CDY71660 Canola cytosol, plasma membrane 38.6 77.9
CDY08528 Canola cytosol 56.37 77.53
CDY66042 Canola plasma membrane 54.4 74.26
VIT_13s0019g01990.t01 Wine grape cytosol, endoplasmic reticulum, plasma membrane 62.84 71.87
KRH15081 Soybean cytosol 60.86 71.82
KRH73056 Soybean cytosol, endoplasmic reticulum, plasma membrane 60.32 71.19
PGSC0003DMT400016230 Potato golgi, mitochondrion, plasma membrane 49.37 69.44
Solyc04g011600.2.1 Tomato plasma membrane 60.68 68.84
CDY08475 Canola plasma membrane 50.81 64.46
GSMUA_Achr6P34050_001 Banana cytosol, peroxisome, plasma membrane 47.76 61.57
Solyc05g053030.1.1 Tomato plasma membrane 55.3 61.35
CDY71876 Canola cytosol, extracellular, mitochondrion 17.95 60.98
CDY01076 Canola extracellular, plasma membrane 21.54 59.41
CDY01075 Canola cytosol, plasma membrane, plastid 16.7 59.24
GSMUA_Achr10P... Banana plasma membrane 33.93 58.51
TraesCS1D01G282300.1 Wheat plasma membrane 52.96 57.17
Zm00001d010520_P001 Maize cytosol, endoplasmic reticulum, plasma membrane 50.99 57.03
TraesCS1A01G283100.1 Wheat plasma membrane 52.42 56.92
TraesCS1B01G292200.1 Wheat plasma membrane 52.42 56.7
GSMUA_Achr2P16430_001 Banana plasma membrane 45.24 56.5
Os05t0457800-01 Rice cytosol, peroxisome, plasma membrane 51.35 54.79
EES18341 Sorghum plastid 50.99 54.41
Zm00001d038366_P001 Maize plasma membrane 49.91 54.3
HORVU1Hr1G072590.2 Barley mitochondrion 52.06 52.63
CDY08476 Canola cytosol 11.67 52.0
CDX74912 Canola peroxisome 40.75 45.31
CDY64226 Canola peroxisome 40.75 45.31
CDX93327 Canola golgi, peroxisome, plasma membrane 40.75 45.31
CDY38016 Canola plasma membrane 40.93 45.15
CDY15166 Canola plasma membrane 40.75 45.13
CDX90045 Canola plasma membrane 40.75 45.13
CDY71692 Canola golgi, plasma membrane 23.7 42.86
CDY69719 Canola cytosol, golgi, peroxisome 32.32 42.15
CDX89973 Canola endoplasmic reticulum, golgi 32.67 40.0
CDY15240 Canola endoplasmic reticulum, golgi 32.32 39.56
CDY22016 Canola plasma membrane 31.6 38.6
PGSC0003DMT400069796 Potato plasma membrane 51.53 38.42
CDY07108 Canola plasma membrane 31.06 37.94
CDY06647 Canola plasma membrane 36.8 35.9
CDY10206 Canola plasma membrane 36.45 35.8
CDY22002 Canola mitochondrion 13.29 33.48
CDY56375 Canola mitochondrion 13.29 33.33
Protein Annotations
EnsemblPlants:CDX98902EnsemblPlantsGene:GSBRNA2T00107008001GO:A0A078ECX3GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016740GO:GO:0016746InterPro:Plipid/glycerol_acylTrfasePANTHER:PTHR15486PANTHER:PTHR15486:SF25
PFAM:PF01553ProteinID:CDX98902ProteinID:CDX98902.1SEG:segSMART:SM00563SUPFAM:SSF69593
TMHMM:TMhelixUniParc:UPI0004EE2ED9MapMan:5.2.1.2.2MapMan:21.9.1.5.2::
Description
BnaC09g49330D
Coordinates
chrLK031907:+:504872..508833
Molecular Weight (calculated)
62328.0 Da
IEP (calculated)
8.251
GRAVY (calculated)
0.231
Length
557 amino acids
Sequence
(BLAST)
001: MESSTTTSYS VVSELEGTLL KTPKPFAYFM LMAFEASGLI RYTLLLFLWP IIALLDVLGY RNCSLKLVIF VATASLRESE IESVARAVLP KFYMDDISMD
101: AWSAFGSCEK RVVVTRMPRV MVERFAKDHL RADEVIGTEI IINRFGYATG FIQESDVDRS IFNSVANLFE DRRPQLGLGR PIISGSQTFL SLCEEQVHAP
201: VPSNYNVQRL HVQLLPVIFH DGRLVKLPTP ATALLILLWI PFGIILAVVR LFIGSMLPLW AIPYVSRIFN IRFIVKGKPP APASAGNQGV LFVCTHRTVM
301: DPVILSYVLG RSIPAVTYSV SRLSEILSPI PTFRLTRARD VDAEIIKKEL SNGDLVVYPE GTTCREPFLL RFSALFAELT DKIVPVAMNY RVGFFHATTA
401: RGWKAFDPIF FFMNPRPVYE VTFLNQLEVE ATCSSGKSPY DVANYVQRIL AATLGFECTN FTRKDKYRVL AGNDGTVSYS SFLDQFKKTA RLFFVLAVTD
501: DASLIEVPVR RKNLPINVIG VATSSISGEA KINPGTELEL GDTQLQYFSF HHPELGT
Best Arabidopsis Sequence Match ( AT5G06090.1 )
(BLAST)
001: MESSTTTSYS VVSELEGTLL KNPKPFAYFM LVAFEASGLI RFATLLFLWP IIALLDVLGY RNGSLKLMIF VATAGLHESE IESVARAVLP KFFMDDISMD
101: AWRAFGSCDK RVVVTRMPRV MVERFAKDHL SADEVIGTEI VVNRFGYATG LIQETNVDQS VFNSVANLFV DRRPQLGLGR HIISDSPTFL SLCEEQVHAP
201: VPSNYNGHNQ RLHVQPLPVI FHDGRLVKLP TPATALIILL WIPFGIILAM IRIFVGFLLP LWAIPYVSRI FNTRFIVKGK PPAQATTGNP GVLFVCTHRT
301: LMDPVVLSYV LGRSIPAVTY SISRLSEILS PIPTFRLTRI RDVDAEMIKK ELSNGDLVVY PEGTTCREPF LLRFSALFAE LTDNIVPVAM NYRVGFFHAT
401: TARGWKGLDP IFFFMNPRPV YEVTFLNQLE VEATCSSGKS PYDVANYVQR ILAATLGFEC TNFTRKDKYR VLAGNDGTVS YLSFLDQVKK VVTTFKPFLH
Arabidopsis Description
GPAT7GPAT7 [Source:UniProtKB/TrEMBL;Acc:A0A178URK3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.