Factsheet for PGSC0003DMT400016230

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g011600.2.1	Tomato	plasma membrane	97.47	78.62
CDY71660	Canola	cytosol, plasma membrane	52.78	75.72
VIT_13s0019g01990.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	77.78	63.24
KRH15081	Soybean	cytosol	72.98	61.23
KRH73056	Soybean	cytosol, endoplasmic reticulum, plasma membrane	71.97	60.38
PGSC0003DMT400073428	Potato	cytosol	44.95	58.94
AT3G11430.1	Thale cress	plasma membrane	74.49	58.76
CDY56848	Canola	plasma membrane	59.6	57.99
Bra034843.1-P	Field mustard	cytosol, plasma membrane, plastid	72.73	57.6
CDY08528	Canola	cytosol	58.59	57.28
AT5G06090.1	Thale cress	plasma membrane	72.22	57.2
CDY66042	Canola	plasma membrane	58.33	56.62
Bra002041.1-P	Field mustard	cytosol	70.96	55.86
Bra009162.1-P	Field mustard	plasma membrane	69.95	55.62
GSMUA_Achr6P34050_001	Banana	cytosol, peroxisome, plasma membrane	57.32	52.55
CDX98902	Canola	plasma membrane	69.44	49.37
AT3G11325.2	Thale cress	endoplasmic reticulum, plasma membrane	48.99	49.36
CDY60435	Canola	plasma membrane	69.44	48.59
GSMUA_Achr10P...	Banana	plasma membrane	39.39	48.3
Zm00001d010520_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	60.1	47.79
TraesCS1B01G292200.1	Wheat	plasma membrane	61.62	47.38
TraesCS1A01G283100.1	Wheat	plasma membrane	61.36	47.37
Zm00001d038366_P001	Maize	plasma membrane	61.11	47.27
TraesCS1D01G282300.1	Wheat	plasma membrane	61.36	47.09
EES18341	Sorghum	plastid	61.87	46.93
GSMUA_Achr2P16430_001	Banana	plasma membrane	52.78	46.86
Os05t0457800-01	Rice	cytosol, peroxisome, plasma membrane	61.11	46.36
Bra034796.1-P	Field mustard	plasma membrane	54.8	45.78
CDY08475	Canola	plasma membrane	50.51	45.56
PGSC0003DMT400003553	Potato	plasma membrane	54.55	45.0
PGSC0003DMT400007387	Potato	plasma membrane	56.31	44.42
Bra002040.1-P	Field mustard	plasma membrane	41.67	43.19
HORVU1Hr1G072590.2	Barley	mitochondrion	59.85	43.01
PGSC0003DMT400091384	Potato	plasma membrane	54.55	42.52
PGSC0003DMT400052335	Potato	cytosol	53.03	41.5
PGSC0003DMT400028782	Potato	plasma membrane	51.26	41.18
PGSC0003DMT400028781	Potato	plasma membrane	51.26	41.09
PGSC0003DMT400000152	Potato	plasma membrane	48.74	38.52
PGSC0003DMT400028775	Potato	plasma membrane	44.95	36.4
PGSC0003DMT400069796	Potato	plasma membrane	65.66	34.81
PGSC0003DMT400044571	Potato	plasma membrane	47.22	34.38
PGSC0003DMT400028779	Potato	plasma membrane	12.37	21.88
CDY01075	Canola	cytosol, plasma membrane, plastid	5.05	12.74

Protein Annotations

MapMan:21.9.1.5.2	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	UniProt:M1A7B2
PFAM:PF01553	EnsemblPlantsGene:PGSC0003DMG400006342	PGSC:PGSC0003DMG400006342	EnsemblPlants:PGSC0003DMT400016230	PANTHER:PTHR15486	PANTHER:PTHR15486:SF25
InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI000294D1D2	SEG:seg

Description

ER glycerol-phosphate acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400006342]

Coordinates

chr4:+:7367109..7369049

Molecular Weight (calculated)

44257.5 Da

IEP (calculated)

10.238

GRAVY (calculated)

0.147

Length

396 amino acids

Sequence
(BLAST)

001: MNSWRIFSSF DKRIVVTKIP RIMVERFVKE HLRADDVIGS ELVVNNSGFA TGFIKDDFDS IFEKVGALFD GETQPSLGLG RPQNGSSFLS LCKEQSHPPF
101: MINKNQDHII KPLPVIFHDG RLVKRPTPSI ALLILLWIPF GVILATIRII IGLVLPLWIV PYLAPLFGGK VIVKGKPPPP ASTTNSGVLF VCTHRTLLDP
201: VVLSTVLQRR IPAVTYSISR LSEILSPIPT VRLTRIREVD AQKIKRQLEK GDLVVCPEGT TCREPFLLRF SALFAELTDR IVPVAMNYRV GFFHATTARG
301: WKGLDPIFFF MNPRPMYEVT FLNQLPVEAT CSSGKSPHDV ANYVQRILAA TLGFECTNFT RKDKYRILAG NDGIVSQNSG TNLANKVVAT FKLFIH

Best Arabidopsis Sequence Match ( AT3G11430.1 )
(BLAST)

001: MVMEQAGTTS YSVVSEFEGT ILKNADSFSY FMLVAFEAAG LIRFAILLFL WPVITLLDVF SYKNAALKLK IFVATVGLRE PEIESVARAV LPKFYMDDVS
101: MDTWRVFSSC KKRVVVTRMP RVMVERFAKE HLRADEVIGT ELIVNRFGFV TGLIRETDVD QSALNRVANL FVGRRPQLGL GKPALTASTN FLSLCEEHIH
201: APIPENYNHG DQQLQLRPLP VIFHDGRLVK RPTPATALII LLWIPFGIIL AVIRIFLGAV LPLWATPYVS QIFGGHIIVK GKPPQPPAAG KSGVLFVCTH
301: RTLMDPVVLS YVLGRSIPAV TYSISRLSEI LSPIPTVRLT RIRDVDAAKI KQQLSKGDLV VCPEGTTCRE PFLLRFSALF AELTDRIVPV AMNYRVGFFH
401: ATTARGWKGL DPIFFFMNPR PVYEITFLNQ LPMEATCSSG KSPHDVANYV QRILAATLGF ECTNFTRKDK YRVLAGNDGT VSYLSLLDQL KKVVSTFEPC
501: LH

Arabidopsis Description

GPAT5Glycerol-3-phosphate acyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAY3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.