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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66042 Canola plasma membrane 94.57 63.97
CDY08528 Canola cytosol 86.59 59.01
CDY56848 Canola plasma membrane 85.14 57.74
Bra002041.1-P Field mustard cytosol 99.28 54.47
PGSC0003DMT400016230 Potato golgi, mitochondrion, plasma membrane 75.72 52.78
CDY71876 Canola cytosol, extracellular, mitochondrion 31.16 52.44
AT3G11430.1 Thale cress plasma membrane 89.13 49.0
CDY08476 Canola cytosol 22.1 48.8
CDY01076 Canola extracellular, plasma membrane 35.51 48.51
KRH15081 Soybean cytosol 81.16 47.46
KRH73056 Soybean cytosol, endoplasmic reticulum, plasma membrane 80.8 47.25
VIT_13s0019g01990.t01 Wine grape cytosol, endoplasmic reticulum, plasma membrane 77.9 44.15
Solyc04g011600.2.1 Tomato plasma membrane 76.09 42.77
CDX98902 Canola plasma membrane 77.9 38.6
CDY60435 Canola plasma membrane 77.54 37.81
GSMUA_Achr6P34050_001 Banana cytosol, peroxisome, plasma membrane 58.7 37.5
Bra002040.1-P Field mustard plasma membrane 51.45 37.17
GSMUA_Achr2P16430_001 Banana plasma membrane 58.33 36.1
GSMUA_Achr10P... Banana plasma membrane 42.03 35.91
Solyc05g053030.1.1 Tomato plasma membrane 65.22 35.86
CDY71692 Canola golgi, plasma membrane 38.77 34.74
Zm00001d010520_P001 Maize cytosol, endoplasmic reticulum, plasma membrane 62.68 34.74
TraesCS1B01G292200.1 Wheat plasma membrane 63.41 33.98
Zm00001d038366_P001 Maize plasma membrane 62.68 33.79
TraesCS1A01G283100.1 Wheat plasma membrane 62.68 33.72
TraesCS1D01G282300.1 Wheat plasma membrane 63.04 33.72
Os05t0457800-01 Rice cytosol, peroxisome, plasma membrane 63.41 33.52
CDY08475 Canola plasma membrane 53.26 33.49
EES18341 Sorghum plastid 62.68 33.14
HORVU1Hr1G072590.2 Barley mitochondrion 63.04 31.58
CDX93327 Canola golgi, peroxisome, plasma membrane 51.81 28.54
CDX74912 Canola peroxisome 51.45 28.34
CDY64226 Canola peroxisome 51.45 28.34
CDX89973 Canola endoplasmic reticulum, golgi 43.48 26.37
CDY15240 Canola endoplasmic reticulum, golgi 43.12 26.15
CDY15166 Canola plasma membrane 47.46 26.04
CDX90045 Canola plasma membrane 47.46 26.04
CDY38016 Canola plasma membrane 47.46 25.94
CDY22016 Canola plasma membrane 40.22 24.34
CDY07108 Canola plasma membrane 39.49 23.9
CDY10206 Canola plasma membrane 48.19 23.46
CDY06647 Canola plasma membrane 48.19 23.29
CDY69719 Canola cytosol, golgi, peroxisome 35.51 22.95
PGSC0003DMT400069796 Potato plasma membrane 57.97 21.42
CDY01075 Canola cytosol, plasma membrane, plastid 1.45 2.55
CDY22002 Canola mitochondrion 0.36 0.45
CDY56375 Canola mitochondrion 0.36 0.45
Protein Annotations
EnsemblPlants:CDY71660EnsemblPlantsGene:GSBRNA2T00017910001GO:A0A078JZ22GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746
InterPro:Plipid/glycerol_acylTrfasePANTHER:PTHR15486PANTHER:PTHR15486:SF25ProteinID:CDY71660ProteinID:CDY71660.1SMART:SM00563
SUPFAM:SSF69593TMHMM:TMhelixUniParc:UPI0004EECDA0UniProt:A0A078JZ22MapMan:35.1:
Description
BnaC01g44840DBnaC01g44840D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JZ22]
Coordinates
chrLK046802:-:1077..1997
Molecular Weight (calculated)
31009.1 Da
IEP (calculated)
9.994
GRAVY (calculated)
0.082
Length
276 amino acids
Sequence
(BLAST)
001: EHIPAPVPEN YNHRNKHLEL RPLPVIFHDG RLVKRPTPPT SLLILTWIPL GIILAAIRIF LGSVLPFWTT RYVSKILGGQ VIVKGKPPQP PAAGNSGVLF
101: VCTHRTLMDP VVLSYVLERS IPAIKQQLSK GDLVVCPEGT TCREPFLLRF SGLFAELTDR IVPVAMNYRV GFFHATTARG WKGLDPIFFF MNPRPVYEVT
201: FLNQLPVEAT CSSGKRPHDV ANYVQRILAA TLGFECTNFT RRDKYRVLAG NDGTVSYLSF LDQLKKVVST FEPFLH
Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)
001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T
Arabidopsis Description
GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.