CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

plastid 3
extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71660	Canola	cytosol, plasma membrane	48.51	35.51
CDY71876	Canola	cytosol, extracellular, mitochondrion	26.73	32.93
CDY08475	Canola	plasma membrane	57.92	26.65
CDY71692	Canola	golgi, plasma membrane	40.59	26.62
CDY08476	Canola	cytosol	16.34	26.4
CDY08528	Canola	cytosol	50.99	25.43
CDY56848	Canola	plasma membrane	49.51	24.57
CDY66042	Canola	plasma membrane	47.03	23.28
CDX98902	Canola	plasma membrane	59.41	21.54
CDY60435	Canola	plasma membrane	58.91	21.02
CDY22016	Canola	plasma membrane	41.58	18.42
CDY38016	Canola	plasma membrane	46.04	18.42
CDX90045	Canola	plasma membrane	45.54	18.29
CDY15166	Canola	plasma membrane	45.54	18.29
CDX89973	Canola	endoplasmic reticulum, golgi	41.09	18.24
CDX93327	Canola	golgi, peroxisome, plasma membrane	45.05	18.16
CDY15240	Canola	endoplasmic reticulum, golgi	40.59	18.02
CDY64226	Canola	peroxisome	44.55	17.96
CDX74912	Canola	peroxisome	44.55	17.96
CDY07108	Canola	plasma membrane	39.6	17.54
CDY10206	Canola	plasma membrane	41.58	14.81
CDY06647	Canola	plasma membrane	41.58	14.71
CDY69719	Canola	cytosol, golgi, peroxisome	29.21	13.82
CDY01075	Canola	cytosol, plasma membrane, plastid	2.97	3.82
CDY22002	Canola	mitochondrion	0.5	0.45
CDY56375	Canola	mitochondrion	0.5	0.45

Protein Annotations

EnsemblPlants:CDY01076	EnsemblPlantsGene:GSBRNA2T00111121001	PANTHER:PTHR15486	PANTHER:PTHR15486:SF25	ProteinID:CDY01076	ProteinID:CDY01076.1
SignalP:SignalP-noTM	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI0004EDD823	MapMan:35.1	:

Description

BnaC05g41240D

Coordinates

chrLK031923:+:1057965..1058763

Molecular Weight (calculated)

22665.1 Da

IEP (calculated)

9.256

GRAVY (calculated)

0.273

Length

202 amino acids

Sequence
(BLAST)

001: MKRPTPANAL IILLWFPFGI ILSVRSLSQC GSYLVSFCRV TVKGKPPPKA GNSRGVLFVC NHRRTMIDPL VISYALGRSI PAVLISELLR FYDILSPVPI
101: VRFTRNRDVD AVVMMEKELS KGDLMVCPEG SICYQPFVLR LYYLSTHMYT IITFLDQLPL EATCSSGNSP FDVANHVQRI LAETLGFECT QLGRKAKYNV
201: LT

Best Arabidopsis Sequence Match ( AT3G11430.1 )
(BLAST)

001: MVMEQAGTTS YSVVSEFEGT ILKNADSFSY FMLVAFEAAG LIRFAILLFL WPVITLLDVF SYKNAALKLK IFVATVGLRE PEIESVARAV LPKFYMDDVS
101: MDTWRVFSSC KKRVVVTRMP RVMVERFAKE HLRADEVIGT ELIVNRFGFV TGLIRETDVD QSALNRVANL FVGRRPQLGL GKPALTASTN FLSLCEEHIH
201: APIPENYNHG DQQLQLRPLP VIFHDGRLVK RPTPATALII LLWIPFGIIL AVIRIFLGAV LPLWATPYVS QIFGGHIIVK GKPPQPPAAG KSGVLFVCTH
301: RTLMDPVVLS YVLGRSIPAV TYSISRLSEI LSPIPTVRLT RIRDVDAAKI KQQLSKGDLV VCPEGTTCRE PFLLRFSALF AELTDRIVPV AMNYRVGFFH
401: ATTARGWKGL DPIFFFMNPR PVYEITFLNQ LPMEATCSSG KSPHDVANYV QRILAATLGF ECTNFTRKDK YRVLAGNDGT VSYLSLLDQL KKVVSTFEPC
501: LH

Arabidopsis Description

GPAT5Glycerol-3-phosphate acyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAY3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.