Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08475 | Canola | plasma membrane | 73.25 | 26.2 |
| CDY08528 | Canola | cytosol | 63.06 | 24.44 |
| CDY56848 | Canola | plasma membrane | 63.06 | 24.32 |
| CDY66042 | Canola | plasma membrane | 60.51 | 23.28 |
| CDY22002 | Canola | mitochondrion | 31.21 | 22.17 |
| CDY56375 | Canola | mitochondrion | 31.21 | 22.07 |
| AT3G11325.2 | Thale cress | endoplasmic reticulum, plasma membrane | 45.86 | 18.32 |
| KRH15081 | Soybean | cytosol | 53.5 | 17.8 |
| KRH73056 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 51.59 | 17.16 |
| VIT_13s0019g01990.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 52.87 | 17.04 |
| CDY60435 | Canola | plasma membrane | 60.51 | 16.78 |
| CDX98902 | Canola | plasma membrane | 59.24 | 16.7 |
| Solyc04g011600.2.1 | Tomato | plasma membrane | 48.41 | 15.48 |
| Solyc05g053030.1.1 | Tomato | plasma membrane | 45.86 | 14.34 |
| GSMUA_Achr2P16430_001 | Banana | plasma membrane | 39.49 | 13.9 |
| Zm00001d010520_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 43.95 | 13.86 |
| Os05t0457800-01 | Rice | cytosol, peroxisome, plasma membrane | 45.22 | 13.6 |
| EES18341 | Sorghum | plastid | 45.22 | 13.6 |
| TraesCS1D01G282300.1 | Wheat | plasma membrane | 44.59 | 13.57 |
| TraesCS1A01G283100.1 | Wheat | plasma membrane | 43.95 | 13.45 |
| TraesCS1B01G292200.1 | Wheat | plasma membrane | 43.95 | 13.4 |
| Zm00001d038366_P001 | Maize | plasma membrane | 43.31 | 13.28 |
| GSMUA_Achr6P34050_001 | Banana | cytosol, peroxisome, plasma membrane | 35.67 | 12.96 |
| HORVU1Hr1G072590.2 | Barley | mitochondrion | 43.95 | 12.52 |
| GSMUA_Achr10P... | Banana | plasma membrane | 24.2 | 11.76 |
| CDY69719 | Canola | cytosol, golgi, peroxisome | 29.94 | 11.01 |
| CDX74912 | Canola | peroxisome | 33.12 | 10.38 |
| CDY64226 | Canola | peroxisome | 33.12 | 10.38 |
| CDX93327 | Canola | golgi, peroxisome, plasma membrane | 32.48 | 10.18 |
| CDY38016 | Canola | plasma membrane | 30.57 | 9.5 |
| PGSC0003DMT400069796 | Potato | plasma membrane | 44.59 | 9.37 |
| CDX90045 | Canola | plasma membrane | 29.94 | 9.34 |
| CDY15166 | Canola | plasma membrane | 29.94 | 9.34 |
| CDY10206 | Canola | plasma membrane | 29.94 | 8.29 |
| CDY06647 | Canola | plasma membrane | 29.94 | 8.23 |
| CDY22016 | Canola | plasma membrane | 22.93 | 7.89 |
| CDY07108 | Canola | plasma membrane | 22.93 | 7.89 |
| CDX89973 | Canola | endoplasmic reticulum, golgi | 22.29 | 7.69 |
| CDY15240 | Canola | endoplasmic reticulum, golgi | 21.02 | 7.25 |
| PGSC0003DMT400016230 | Potato | golgi, mitochondrion, plasma membrane | 12.74 | 5.05 |
| CDY01076 | Canola | extracellular, plasma membrane | 3.82 | 2.97 |
| CDY71876 | Canola | cytosol, extracellular, mitochondrion | 2.55 | 2.44 |
| CDY08476 | Canola | cytosol | 1.91 | 2.4 |
| CDY71660 | Canola | cytosol, plasma membrane | 2.55 | 1.45 |
| CDY71692 | Canola | golgi, plasma membrane | 2.55 | 1.3 |
Protein Annotations
| EnsemblPlants:CDY01075 | EnsemblPlantsGene:GSBRNA2T00111120001 | GO:A0A078EG94 | PANTHER:PTHR15486 | PANTHER:PTHR15486:SF25 | ProteinID:CDY01075 |
| ProteinID:CDY01075.1 | TMHMM:TMhelix | UniParc:UPI0004EE1309 | MapMan:35.1 | : | : |
Description
BnaC05g41250D
Coordinates
chrLK031923:+:1050412..1050885
Molecular Weight (calculated)
18403.9 Da
IEP (calculated)
8.847
GRAVY (calculated)
0.159
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMETSKATS PHSVVSEFEG TLLNRDDPFS YFMLLSFDAS GVIRFALLLF LWPVTALLNV FSYKNAALKL MIFVATAGLR ESEIELVARD VLPKFYMDDL
101: SMDTWTRMPR LMVERFAKQY LIAEEVIGVR MRELLRVYLW RMKNMKNIER EKVDLKM
101: SMDTWTRMPR LMVERFAKQY LIAEEVIGVR MRELLRVYLW RMKNMKNIER EKVDLKM
001: MVMEQAGTTS YSVVSEFEGT ILKNADSFSY FMLVAFEAAG LIRFAILLFL WPVITLLDVF SYKNAALKLK IFVATVGLRE PEIESVARAV LPKFYMDDVS
101: MDTWRVFSSC KKRVVVTRMP RVMVERFAKE HLRADEVIGT ELIVNRFGFV TGLIRETDVD QSALNRVANL FVGRRPQLGL GKPALTASTN FLSLCEEHIH
201: APIPENYNHG DQQLQLRPLP VIFHDGRLVK RPTPATALII LLWIPFGIIL AVIRIFLGAV LPLWATPYVS QIFGGHIIVK GKPPQPPAAG KSGVLFVCTH
301: RTLMDPVVLS YVLGRSIPAV TYSISRLSEI LSPIPTVRLT RIRDVDAAKI KQQLSKGDLV VCPEGTTCRE PFLLRFSALF AELTDRIVPV AMNYRVGFFH
401: ATTARGWKGL DPIFFFMNPR PVYEITFLNQ LPMEATCSSG KSPHDVANYV QRILAATLGF ECTNFTRKDK YRVLAGNDGT VSYLSLLDQL KKVVSTFEPC
501: LH
101: MDTWRVFSSC KKRVVVTRMP RVMVERFAKE HLRADEVIGT ELIVNRFGFV TGLIRETDVD QSALNRVANL FVGRRPQLGL GKPALTASTN FLSLCEEHIH
201: APIPENYNHG DQQLQLRPLP VIFHDGRLVK RPTPATALII LLWIPFGIIL AVIRIFLGAV LPLWATPYVS QIFGGHIIVK GKPPQPPAAG KSGVLFVCTH
301: RTLMDPVVLS YVLGRSIPAV TYSISRLSEI LSPIPTVRLT RIRDVDAAKI KQQLSKGDLV VCPEGTTCRE PFLLRFSALF AELTDRIVPV AMNYRVGFFH
401: ATTARGWKGL DPIFFFMNPR PVYEITFLNQ LPMEATCSSG KSPHDVANYV QRILAATLGF ECTNFTRKDK YRVLAGNDGT VSYLSLLDQL KKVVSTFEPC
501: LH
Arabidopsis Description
GPAT5Glycerol-3-phosphate acyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAY3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.