Factsheet for VIT_13s0019g01990.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 3
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, mitochondrion
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73056	Soybean	cytosol, endoplasmic reticulum, plasma membrane	76.18	78.6
KRH15081	Soybean	cytosol	75.77	78.18
CDY71660	Canola	cytosol, plasma membrane	44.15	77.9
PGSC0003DMT400016230	Potato	golgi, mitochondrion, plasma membrane	63.24	77.78
CDY56848	Canola	plasma membrane	64.89	77.64
CDY08528	Canola	cytosol	63.66	76.54
Solyc04g011600.2.1	Tomato	plasma membrane	76.8	76.17
CDY66042	Canola	plasma membrane	62.01	74.02
Bra034843.1-P	Field mustard	cytosol, plasma membrane, plastid	75.77	73.8
AT5G06090.1	Thale cress	plasma membrane	74.74	72.8
AT3G11430.1	Thale cress	plasma membrane	74.74	72.51
Bra002041.1-P	Field mustard	cytosol	73.51	71.17
Bra009162.1-P	Field mustard	plasma membrane	72.69	71.08
Solyc05g053030.1.1	Tomato	plasma membrane	67.15	65.14
GSMUA_Achr6P34050_001	Banana	cytosol, peroxisome, plasma membrane	56.88	64.12
AT3G11325.2	Thale cress	endoplasmic reticulum, plasma membrane	50.92	63.1
CDX98902	Canola	plasma membrane	71.87	62.84
CDY60435	Canola	plasma membrane	72.28	62.19
Bra002040.1-P	Field mustard	plasma membrane	48.67	62.04
GSMUA_Achr2P16430_001	Banana	plasma membrane	56.26	61.44
GSMUA_Achr10P...	Banana	plasma membrane	39.84	60.06
Os05t0457800-01	Rice	cytosol, peroxisome, plasma membrane	64.07	59.77
Zm00001d010520_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	60.99	59.64
TraesCS1B01G292200.1	Wheat	plasma membrane	62.63	59.22
TraesCS1A01G283100.1	Wheat	plasma membrane	62.22	59.06
CDY08475	Canola	plasma membrane	53.18	59.0
Zm00001d038366_P001	Maize	plasma membrane	62.01	58.98
TraesCS1D01G282300.1	Wheat	plasma membrane	62.22	58.72
EES18341	Sorghum	plastid	62.83	58.62
Bra034796.1-P	Field mustard	plasma membrane	56.88	58.44
HORVU1Hr1G072590.2	Barley	mitochondrion	61.19	54.08
CDY01075	Canola	cytosol, plasma membrane, plastid	17.04	52.87
VIT_01s0026g01210.t01	Wine grape	plasma membrane	53.8	52.09
VIT_08s0007g02000.t01	Wine grape	golgi	51.33	50.1
VIT_15s0046g02400.t01	Wine grape	plasma membrane	46.41	45.11
PGSC0003DMT400069796	Potato	plasma membrane	62.42	40.7
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	41.48	40.48
VIT_12s0142g00040.t01	Wine grape	plasma membrane	43.74	39.89
VIT_07s0005g01760.t01	Wine grape	plasma membrane	39.43	36.71

Protein Annotations

EntrezGene:100261491	wikigene:100261491	MapMan:21.9.1.5.2	MapMan:5.2.1.2.2	ProteinID:CCB56326	ProteinID:CCB56326.1
UniProt:F6HNV6	EMBL:FN595998	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010143	GO:GO:0016020	GO:GO:0016021
GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	GO:GO:0016787	GO:GO:0016791	GO:GO:0090447
EntrezGene:LOC100261491	wikigene:LOC100261491	PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF25
InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI00015C986E	ArrayExpress:VIT_13s0019g01990
EnsemblPlantsGene:VIT_13s0019g01990	EnsemblPlants:VIT_13s0019g01990.t01	unigene:Vvi.24044	RefSeq:XP_002283087	RefSeq:XP_002283087.1	SEG:seg

Description

No Description!

Coordinates

chr13:-:3298346..3300289

Molecular Weight (calculated)

54744.4 Da

IEP (calculated)

9.131

GRAVY (calculated)

0.198

Length

487 amino acids

Sequence
(BLAST)

001: MESVVSELEG TLVKDPDPFS YFMLVAFEAS GLVRFALLLI LWPIIRLLDM FGMGDAGLRL AIFVAFAGVH ESEIESVARA VLPKFYMDDL DMEAWKVFSS
101: YDRRVVVTKT PRVMVERFLK EHLRADEVIG SELVVNRFGF ATGFTRNEAG SIADRVSMLF EDNQPDMGLG RIPSGSSFLS LCREQSHPPF MTNQDRDRQL
201: LRPLPVIFHD GRLVKRPLPS TALLIIFWIP FGILIAITRI AMGMLLPMWL IPYMSRLLGG KIIVKGKPPP PASGSDSGVL FVCTHRTLMD PVVLSTVLQR
301: SIPAVTYSIS RLSEILSPIP TVRLTRIRHV DAEKIKRELA KGDLAVCPEG TTCREPFLLR FSALFAELTD RIVPVAMNYR VGFFHATTAR GWKGLDPIFF
401: FMNPRPIYEV TFLNQLPVEA TCSAGKSPHD VANYVQRILA ATLGFECTNF TRKDKYRVLA GNDGIVSYIS FLDQMKKVVT NFKPFIH

Best Arabidopsis Sequence Match ( AT3G11430.1 )
(BLAST)

001: MVMEQAGTTS YSVVSEFEGT ILKNADSFSY FMLVAFEAAG LIRFAILLFL WPVITLLDVF SYKNAALKLK IFVATVGLRE PEIESVARAV LPKFYMDDVS
101: MDTWRVFSSC KKRVVVTRMP RVMVERFAKE HLRADEVIGT ELIVNRFGFV TGLIRETDVD QSALNRVANL FVGRRPQLGL GKPALTASTN FLSLCEEHIH
201: APIPENYNHG DQQLQLRPLP VIFHDGRLVK RPTPATALII LLWIPFGIIL AVIRIFLGAV LPLWATPYVS QIFGGHIIVK GKPPQPPAAG KSGVLFVCTH
301: RTLMDPVVLS YVLGRSIPAV TYSISRLSEI LSPIPTVRLT RIRDVDAAKI KQQLSKGDLV VCPEGTTCRE PFLLRFSALF AELTDRIVPV AMNYRVGFFH
401: ATTARGWKGL DPIFFFMNPR PVYEITFLNQ LPMEATCSSG KSPHDVANYV QRILAATLGF ECTNFTRKDK YRVLAGNDGT VSYLSLLDQL KKVVSTFEPC
501: LH

Arabidopsis Description

GPAT5Glycerol-3-phosphate acyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAY3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.