Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009162.1-P | Field mustard | plasma membrane | 89.4 | 89.76 |
| AT3G11430.1 | Thale cress | plasma membrane | 81.2 | 80.88 |
| CDX98902 | Canola | plasma membrane | 88.6 | 79.53 |
| CDY60435 | Canola | plasma membrane | 89.0 | 78.62 |
| VIT_13s0019g01990.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 72.8 | 74.74 |
| KRH73056 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 69.0 | 73.09 |
| KRH15081 | Soybean | cytosol | 69.0 | 73.09 |
| PGSC0003DMT400016230 | Potato | golgi, mitochondrion, plasma membrane | 57.2 | 72.22 |
| Solyc04g011600.2.1 | Tomato | plasma membrane | 69.8 | 71.08 |
| AT3G11325.2 | Thale cress | endoplasmic reticulum, plasma membrane | 52.0 | 66.16 |
| GSMUA_Achr6P34050_001 | Banana | cytosol, peroxisome, plasma membrane | 53.8 | 62.27 |
| Solyc05g053030.1.1 | Tomato | plasma membrane | 61.8 | 61.55 |
| GSMUA_Achr10P... | Banana | plasma membrane | 38.2 | 59.13 |
| Zm00001d010520_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 58.8 | 59.04 |
| TraesCS1A01G283100.1 | Wheat | plasma membrane | 60.0 | 58.48 |
| TraesCS1D01G282300.1 | Wheat | plasma membrane | 60.0 | 58.14 |
| TraesCS1B01G292200.1 | Wheat | plasma membrane | 59.8 | 58.06 |
| GSMUA_Achr2P16430_001 | Banana | plasma membrane | 51.2 | 57.4 |
| Os05t0457800-01 | Rice | cytosol, peroxisome, plasma membrane | 58.8 | 56.32 |
| Zm00001d038366_P001 | Maize | plasma membrane | 57.6 | 56.25 |
| EES18341 | Sorghum | plastid | 58.6 | 56.13 |
| HORVU1Hr1G072590.2 | Barley | mitochondrion | 59.2 | 53.72 |
| AT2G38110.1 | Thale cress | cytosol, golgi, plasma membrane | 45.6 | 45.51 |
| AT1G01610.1 | Thale cress | plasma membrane | 44.8 | 44.53 |
| AT4G00400.1 | Thale cress | cytosol, golgi, plasma membrane | 44.2 | 44.2 |
| PGSC0003DMT400069796 | Potato | plasma membrane | 57.6 | 38.55 |
| AT1G02390.1 | Thale cress | plasma membrane | 37.8 | 35.66 |
| AT1G06520.1 | Thale cress | plasma membrane | 40.8 | 34.87 |
| AT4G01950.2 | Thale cress | cytosol, golgi, peroxisome | 37.4 | 34.12 |
Protein Annotations
| MapMan:21.9.1.5.2 | MapMan:5.2.1.2.2 | EntrezGene:830496 | UniProt:A0A178URK3 | ProteinID:AED90963.1 | ArrayExpress:AT5G06090 |
| EnsemblPlantsGene:AT5G06090 | RefSeq:AT5G06090 | TAIR:AT5G06090 | RefSeq:AT5G06090-TAIR-G | EnsemblPlants:AT5G06090.1 | TAIR:AT5G06090.1 |
| Symbol:ATGPAT7 | ProteinID:BAA98198.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004366 | GO:GO:0005575 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008654 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0010143 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016024 | GO:GO:0016311 | GO:GO:0016740 |
| GO:GO:0016746 | GO:GO:0016787 | GO:GO:0016791 | GO:GO:0090447 | GO:GO:0102420 | RefSeq:NP_196227.1 |
| ProteinID:OAO96448.1 | PFAM:PF01553 | PFAM:PF12710 | PANTHER:PTHR15486 | PANTHER:PTHR15486:SF25 | InterPro:Plipid/glycerol_acylTrfase |
| UniProt:Q9LHS7 | SMART:SM00563 | SUPFAM:SSF69593 | TMHMM:TMhelix | UniParc:UPI00000A98A9 | SEG:seg |
Description
GPAT7GPAT7 [Source:UniProtKB/TrEMBL;Acc:A0A178URK3]
Coordinates
chr5:+:1835047..1837037
Molecular Weight (calculated)
56085.6 Da
IEP (calculated)
8.719
GRAVY (calculated)
0.245
Length
500 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSTTTSYS VVSELEGTLL KNPKPFAYFM LVAFEASGLI RFATLLFLWP IIALLDVLGY RNGSLKLMIF VATAGLHESE IESVARAVLP KFFMDDISMD
101: AWRAFGSCDK RVVVTRMPRV MVERFAKDHL SADEVIGTEI VVNRFGYATG LIQETNVDQS VFNSVANLFV DRRPQLGLGR HIISDSPTFL SLCEEQVHAP
201: VPSNYNGHNQ RLHVQPLPVI FHDGRLVKLP TPATALIILL WIPFGIILAM IRIFVGFLLP LWAIPYVSRI FNTRFIVKGK PPAQATTGNP GVLFVCTHRT
301: LMDPVVLSYV LGRSIPAVTY SISRLSEILS PIPTFRLTRI RDVDAEMIKK ELSNGDLVVY PEGTTCREPF LLRFSALFAE LTDNIVPVAM NYRVGFFHAT
401: TARGWKGLDP IFFFMNPRPV YEVTFLNQLE VEATCSSGKS PYDVANYVQR ILAATLGFEC TNFTRKDKYR VLAGNDGTVS YLSFLDQVKK VVTTFKPFLH
101: AWRAFGSCDK RVVVTRMPRV MVERFAKDHL SADEVIGTEI VVNRFGYATG LIQETNVDQS VFNSVANLFV DRRPQLGLGR HIISDSPTFL SLCEEQVHAP
201: VPSNYNGHNQ RLHVQPLPVI FHDGRLVKLP TPATALIILL WIPFGIILAM IRIFVGFLLP LWAIPYVSRI FNTRFIVKGK PPAQATTGNP GVLFVCTHRT
301: LMDPVVLSYV LGRSIPAVTY SISRLSEILS PIPTFRLTRI RDVDAEMIKK ELSNGDLVVY PEGTTCREPF LLRFSALFAE LTDNIVPVAM NYRVGFFHAT
401: TARGWKGLDP IFFFMNPRPV YEVTFLNQLE VEATCSSGKS PYDVANYVQR ILAATLGFEC TNFTRKDKYR VLAGNDGTVS YLSFLDQVKK VVTTFKPFLH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.