Factsheet for PGSC0003DMT400069796

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
nucleus 2
plasma membrane 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g053030.1.1	Tomato	plasma membrane	55.42	82.47
PGSC0003DMT400016230	Potato	golgi, mitochondrion, plasma membrane	34.81	65.66
VIT_13s0019g01990.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	40.7	62.42
KRH15081	Soybean	cytosol	39.22	62.08
KRH73056	Soybean	cytosol, endoplasmic reticulum, plasma membrane	38.82	61.44
CDY56848	Canola	plasma membrane	32.4	59.46
CDY08528	Canola	cytosol	31.73	58.52
CDY71660	Canola	cytosol, plasma membrane	21.42	57.97
AT5G06090.1	Thale cress	plasma membrane	38.55	57.6
AT3G11430.1	Thale cress	plasma membrane	38.42	57.17
CDY66042	Canola	plasma membrane	31.06	56.86
Bra034843.1-P	Field mustard	cytosol, plasma membrane, plastid	38.02	56.8
Bra009162.1-P	Field mustard	plasma membrane	37.75	56.63
Bra002041.1-P	Field mustard	cytosol	37.35	55.47
GSMUA_Achr6P34050_001	Banana	cytosol, peroxisome, plasma membrane	31.33	54.17
Bra002040.1-P	Field mustard	plasma membrane	27.18	53.14
CDX98902	Canola	plasma membrane	38.42	51.53
CDY60435	Canola	plasma membrane	38.82	51.24
Zm00001d010520_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	34.14	51.2
PGSC0003DMT400073428	Potato	cytosol	20.48	50.66
AT3G11325.2	Thale cress	endoplasmic reticulum, plasma membrane	26.37	50.13
Zm00001d038366_P001	Maize	plasma membrane	34.27	50.0
TraesCS1B01G292200.1	Wheat	plasma membrane	34.4	49.9
EES18341	Sorghum	plastid	34.81	49.81
TraesCS1A01G283100.1	Wheat	plasma membrane	34.14	49.71
TraesCS1D01G282300.1	Wheat	plasma membrane	34.14	49.42
GSMUA_Achr2P16430_001	Banana	plasma membrane	29.18	48.88
CDY08475	Canola	plasma membrane	28.51	48.52
Os05t0457800-01	Rice	cytosol, peroxisome, plasma membrane	33.87	48.47
Bra034796.1-P	Field mustard	plasma membrane	30.66	48.31
GSMUA_Achr10P...	Banana	plasma membrane	20.08	46.44
PGSC0003DMT400003553	Potato	plasma membrane	29.59	46.04
HORVU1Hr1G072590.2	Barley	mitochondrion	33.73	45.73
PGSC0003DMT400007387	Potato	plasma membrane	30.12	44.82
CDY01075	Canola	cytosol, plasma membrane, plastid	9.37	44.59
PGSC0003DMT400028781	Potato	plasma membrane	29.05	43.93
PGSC0003DMT400091384	Potato	plasma membrane	29.85	43.9
PGSC0003DMT400052335	Potato	cytosol	29.72	43.87
PGSC0003DMT400028782	Potato	plasma membrane	28.92	43.81
PGSC0003DMT400000152	Potato	plasma membrane	27.04	40.32
PGSC0003DMT400028775	Potato	plasma membrane	26.37	40.29
PGSC0003DMT400028779	Potato	plasma membrane	11.11	37.05
PGSC0003DMT400044571	Potato	plasma membrane	25.57	35.11

Protein Annotations

EntrezGene:102598078	MapMan:11.1.2.6	MapMan:21.9.1.5.2	Gene3D:3.30.40.10	MapMan:5.2.1.2.2	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	InterPro:IPR001841	InterPro:IPR013083	UniProt:M1CL67
PFAM:PF13639	EnsemblPlantsGene:PGSC0003DMG400027142	PGSC:PGSC0003DMG400027142	EnsemblPlants:PGSC0003DMT400069796	PFscan:PS50089	PANTHER:PTHR15486
PANTHER:PTHR15486:SF25	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00184	SMART:SM00563	SUPFAM:SSF57850	SUPFAM:SSF69593
TMHMM:TMhelix	UniParc:UPI0002968904	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

ER glycerol-phosphate acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400027142]

Coordinates

chr5:+:48301754..48311561

Molecular Weight (calculated)

83502.2 Da

IEP (calculated)

7.131

GRAVY (calculated)

0.125

Length

747 amino acids

Sequence
(BLAST)

001: MDSIVSELEG VLLKNPNPFC YFMLLAFEAS GVVRFALLLL VWPIIRFLEF LGREEYGLKL TIFVATIGVK ISEIESVSRA VLPKFYFDDI NMEAWRMFSL
101: YDKKVVVTKI PKIMVERFVK VHLRCDEVVG SELVISKYGF ASGLIKDDFD KIKDGIIELF GNQKPSLGLG RSKCGSSFLS LCKEQLQPPF LRSKNQNQQQ
201: QQIIINPLPV IFHDGRLVIR PTPFLALIIL LWIPLGIIIA TIRILIGLIF PIWSIPYLTP LFGGKVIVKG NPPLPPSSSA ITSTNPGVLF VCTHRTLMDP
301: VVLSTILQRK IPTVTYSISR LTEVLSPIPT VRLTRVRNVD ARKIKCQLEK GDLIMCPEGT TCREPFLLRF SALFAELTNS IVPVAMNYRV GFFHGTTARG
401: WKAMDPIFFL MNPRPIYESF KGGSPNFVNV DQFPHKSDET QKHSDEYVEM GCRSVEFEAI EEPRVHAGRP VNTNSLAFLV TVLLLFMILN SHQMSPNFLL
501: WLVLGVFFMA TTLRMYATCQ QLQAQAQAHA VAASGLLGPT ELRLHMPPSI ALATRGRLRG LRLQLALLDR EFDDLDYETL RALDSDDAPT TPSMTEEEIN
601: ALPVHKYKVS GPQSGSLVIL YLNFSDEVED NIILISWLLL ILMTALLGSA GTSTHPTSSS GSTEKKQEPA NAIGGTKNSD DELTCSVCLE QVNDGELIRS
701: LPCLHQFHAN CIDPWLRQRG TCPVCKFRAG SRWDENGQGG EDAYDMV

Best Arabidopsis Sequence Match ( AT3G11430.1 )
(BLAST)

001: MVMEQAGTTS YSVVSEFEGT ILKNADSFSY FMLVAFEAAG LIRFAILLFL WPVITLLDVF SYKNAALKLK IFVATVGLRE PEIESVARAV LPKFYMDDVS
101: MDTWRVFSSC KKRVVVTRMP RVMVERFAKE HLRADEVIGT ELIVNRFGFV TGLIRETDVD QSALNRVANL FVGRRPQLGL GKPALTASTN FLSLCEEHIH
201: APIPENYNHG DQQLQLRPLP VIFHDGRLVK RPTPATALII LLWIPFGIIL AVIRIFLGAV LPLWATPYVS QIFGGHIIVK GKPPQPPAAG KSGVLFVCTH
301: RTLMDPVVLS YVLGRSIPAV TYSISRLSEI LSPIPTVRLT RIRDVDAAKI KQQLSKGDLV VCPEGTTCRE PFLLRFSALF AELTDRIVPV AMNYRVGFFH
401: ATTARGWKGL DPIFFFMNPR PVYEITFLNQ LPMEATCSSG KSPHDVANYV QRILAATLGF ECTNFTRKDK YRVLAGNDGT VSYLSLLDQL KKVVSTFEPC
501: LH

Arabidopsis Description

GPAT5Glycerol-3-phosphate acyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAY3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.