Factsheet for PGSC0003DMT400000152

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plastid 1
mitochondrion 2
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g094700.2.1	Tomato	plasma membrane	99.2	99.2
KRH48117	Soybean	plasma membrane	82.04	82.36
KRH64978	Soybean	plasma membrane	80.24	80.4
Bra033249.1-P	Field mustard	plasma membrane	75.45	80.25
VIT_15s0046g02400.t01	Wine grape	plasma membrane	79.04	79.04
CDY71876	Canola	cytosol, extracellular, mitochondrion	25.75	78.66
CDY15166	Canola	plasma membrane	78.44	78.13
CDY38016	Canola	plasma membrane	78.44	77.82
CDX90045	Canola	plasma membrane	78.04	77.73
Bra032643.1-P	Field mustard	plasma membrane	77.25	77.25
AT1G01610.1	Thale cress	plasma membrane	76.25	75.94
AT4G00400.1	Thale cress	cytosol, golgi, plasma membrane	74.85	75.0
Bra037338.1-P	Field mustard	plasma membrane	74.65	74.8
GSMUA_Achr1P06780_001	Banana	plasma membrane	51.7	63.17
PGSC0003DMT400052335	Potato	cytosol	59.68	59.09
TraesCS6D01G043000.1	Wheat	mitochondrion	56.49	56.04
TraesCS6B01G051800.1	Wheat	mitochondrion	55.69	55.03
EES04353	Sorghum	plastid	56.69	54.83
TraesCS6A01G037400.1	Wheat	endoplasmic reticulum	55.29	54.64
PGSC0003DMT400007387	Potato	plasma membrane	54.29	54.18
Zm00001d014984_P001	Maize	endoplasmic reticulum	55.69	54.17
TraesCS6B01G052300.1	Wheat	mitochondrion	54.89	54.13
PGSC0003DMT400028782	Potato	plasma membrane	51.1	51.93
PGSC0003DMT400028779	Potato	plasma membrane	22.75	50.89
PGSC0003DMT400003553	Potato	plasma membrane	48.7	50.83
PGSC0003DMT400073428	Potato	cytosol	30.54	50.66
Os02t0114400-00	Rice	mitochondrion	22.95	50.44
PGSC0003DMT400091384	Potato	plasma membrane	50.3	49.61
PGSC0003DMT400028781	Potato	plasma membrane	48.9	49.6
PGSC0003DMT400016230	Potato	golgi, mitochondrion, plasma membrane	38.52	48.74
PGSC0003DMT400028775	Potato	plasma membrane	47.51	48.67
HORVU6Hr1G006810.7	Barley	mitochondrion	55.29	44.18
PGSC0003DMT400044571	Potato	plasma membrane	43.51	40.07
PGSC0003DMT400069796	Potato	plasma membrane	40.32	27.04

Protein Annotations

EntrezGene:102598882	MapMan:21.9.1.5.1	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M0ZG69	PFAM:PF01553
PFAM:PF12710	EnsemblPlantsGene:PGSC0003DMG400000046	PGSC:PGSC0003DMG400000046	EnsemblPlants:PGSC0003DMT400000152	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27
InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI000294D45A
RefSeq:XP_006339585.1	SEG:seg	:	:	:	:

Description

GPAT [Source:PGSC_GENE;Acc:PGSC0003DMG400000046]

Coordinates

chr1:+:72271885..72275263

Molecular Weight (calculated)

55721.7 Da

IEP (calculated)

9.670

GRAVY (calculated)

0.129

Length

501 amino acids

Sequence
(BLAST)

001: MSLPKSKKSF PSVTTCDTSA VNRHSVAADL DGTLLISRSS FPYFMLVAIE AGSLFRGLIL LLSFPLIAIA YVFISEALAI QMLIYISFAG LKVRDIELAS
101: RAVLPRFYAT DVRKESFEVF DQCKRKVVVT ANPTIMVEPF VKDFLGGDKV LGTEIEVNPK TKKATGFVKS PGILVGKWKK LSILKEFGEE MPDIGLGDRE
201: SDHDFMSICK EGYMVLPSES AKPVPLDRLK SRLIFHDGRL VQRPTPFNAL VTYIWLPFGF ALGVFRVYFN LPLPERIVRY TYGMVGINLV IKGPRPPPPS
301: PGTPGNLYVC NHRSALDPII IAIALGRKVS TVTYSVSKLS RFLSPIPAIA LTRDREADAA MIKKLLEKGD LVVCPEGTTC REPFLLRFSA LFAELSDRIV
401: PVAVDSKQSM FFGTTVRGVK FWDPYFFFMN PRPTYELTFL EPLPMEMTCK AGKTSIEVAN HVQKVLGGVL GFECTQLTRK DKYMLLGGND GKVESMYSKK
501: A

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.