Factsheet for Bra032643.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
peroxisome 1
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum, mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38016	Canola	plasma membrane	98.6	97.82
Bra033249.1-P	Field mustard	plasma membrane	90.42	96.18
AT1G01610.1	Thale cress	plasma membrane	95.01	94.63
Bra037338.1-P	Field mustard	plasma membrane	87.82	88.0
KRH48117	Soybean	plasma membrane	80.84	81.16
VIT_15s0046g02400.t01	Wine grape	plasma membrane	79.84	79.84
KRH64978	Soybean	plasma membrane	79.64	79.8
Solyc01g094700.2.1	Tomato	plasma membrane	77.25	77.25
PGSC0003DMT400000152	Potato	plasma membrane	77.25	77.25
Bra017137.1-P	Field mustard	cytosol, golgi, peroxisome	62.67	62.67
GSMUA_Achr1P06780_001	Banana	plasma membrane	50.3	61.46
Bra005137.1-P	Field mustard	peroxisome	61.28	61.28
TraesCS6D01G043000.1	Wheat	mitochondrion	55.29	54.85
EES04353	Sorghum	plastid	56.69	54.83
TraesCS6B01G051800.1	Wheat	mitochondrion	54.69	54.04
TraesCS6A01G037400.1	Wheat	endoplasmic reticulum	54.29	53.65
Zm00001d014984_P001	Maize	endoplasmic reticulum	54.29	52.82
TraesCS6B01G052300.1	Wheat	mitochondrion	53.29	52.56
Os02t0114400-00	Rice	mitochondrion	22.36	49.12
Bra009162.1-P	Field mustard	plasma membrane	45.71	45.98
Bra034843.1-P	Field mustard	cytosol, plasma membrane, plastid	45.31	45.4
HORVU6Hr1G006810.7	Barley	mitochondrion	54.09	43.22
Bra002041.1-P	Field mustard	cytosol	42.71	42.54
Bra034796.1-P	Field mustard	plasma membrane	38.52	40.72
Bra033323.1-P	Field mustard	endoplasmic reticulum, golgi	36.93	40.66
Bra036303.1-P	Field mustard	plasma membrane	36.53	40.13
Bra015507.1-P	Field mustard	endoplasmic reticulum, plasma membrane	42.12	36.95
Bra000903.1-P	Field mustard	mitochondrion, plasma membrane	38.12	36.73
Bra002040.1-P	Field mustard	plasma membrane	27.54	36.13

Protein Annotations

MapMan:21.9.1.5.1	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	EnsemblPlantsGene:Bra032643	EnsemblPlants:Bra032643.1	EnsemblPlants:Bra032643.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016746	InterPro:HAD_sf	InterPro:IPR023214
UniProt:M4EV10	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563
SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI0002543161	SEG:seg	:	:

Description

AT1G01610 (E=2e-249) ATGPAT4, GPAT4 | GPAT4 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 4); 1-acylglycerol-3-phosphate O-acyltransferase/ acyltransferase

Coordinates

chrA09:-:36990325..36992815

Molecular Weight (calculated)

55912.9 Da

IEP (calculated)

9.555

GRAVY (calculated)

0.079

Length

501 amino acids

Sequence
(BLAST)

001: MSPAKKKSTS FPPISECKSG EYDSIAADLD GTLLLSRSSF PYFMLVAIEA GSLFRGLILL LSLPIVIVAY LFVSEAIGIQ ILIYISFAGI KIRDNELVSR
101: AVLPRFYAAD VRKDSFEVFD KCKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MRATGFVKKP GVLVGDLKRL AILKEFGDES PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIERLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSIFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GTPGNLYVLT HRTALGPIII AIALGRKISC VTYSVSRLSR MLSPIPAVAL TRDRAADAAR MRKLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPIEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESIKKTK
501: E

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.