Factsheet for TraesCS6B01G051800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	endoplasmic reticulum, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G043000.1	Wheat	mitochondrion	95.86	96.24
TraesCS6B01G052300.1	Wheat	mitochondrion	93.89	93.7
Zm00001d014984_P001	Maize	endoplasmic reticulum	80.47	79.22
EES04353	Sorghum	plastid	80.67	78.96
HORVU6Hr1G006810.7	Barley	mitochondrion	92.5	74.8
Os02t0114400-00	Rice	mitochondrion	33.14	73.68
CDY71876	Canola	cytosol, extracellular, mitochondrion	20.12	62.2
GSMUA_Achr1P06780_001	Banana	plasma membrane	48.52	60.0
TraesCS4B01G282100.1	Wheat	peroxisome	56.21	57.0
KRH48117	Soybean	plasma membrane	56.02	56.91
KRH64978	Soybean	plasma membrane	56.02	56.8
VIT_15s0046g02400.t01	Wine grape	plasma membrane	55.23	55.89
PGSC0003DMT400000152	Potato	plasma membrane	55.03	55.69
Solyc01g094700.2.1	Tomato	plasma membrane	54.83	55.49
Bra033249.1-P	Field mustard	plasma membrane	51.48	55.41
Bra037338.1-P	Field mustard	plasma membrane	54.64	55.4
AT1G01610.1	Thale cress	plasma membrane	54.64	55.07
TraesCS3B01G400000.1	Wheat	golgi	53.85	54.93
Bra032643.1-P	Field mustard	plasma membrane	54.04	54.69
AT4G00400.1	Thale cress	cytosol, golgi, plasma membrane	53.85	54.6
CDY38016	Canola	plasma membrane	54.24	54.46
CDY15166	Canola	plasma membrane	53.85	54.27
CDX90045	Canola	plasma membrane	53.85	54.27
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	51.08	50.68
TraesCS1B01G287900.1	Wheat	golgi, peroxisome, plasma membrane	51.08	50.49
TraesCS4B01G066500.1	Wheat	plasma membrane	50.1	46.61
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	36.49	46.13
TraesCS1B01G292200.1	Wheat	plasma membrane	44.58	43.88
TraesCS5B01G092200.1	Wheat	plasma membrane	41.62	40.34
TraesCS3B01G371300.1	Wheat	mitochondrion, plasma membrane, plastid	41.03	38.81
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	39.65	37.5
TraesCS7B01G419500.1	Wheat	mitochondrion, plasma membrane	38.26	36.53
TraesCS2B01G158000.1	Wheat	mitochondrion	37.87	36.36
TraesCS1B01G233800.1	Wheat	plastid	35.11	36.33
TraesCS5B01G511500.1	Wheat	mitochondrion	38.86	34.87
TraesCS3B01G173200.1	Wheat	mitochondrion	36.29	34.2

Protein Annotations

Gene3D:1.20.1440.100	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563
SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G051800	EnsemblPlants:TraesCS6B01G051800.1	TIGR:cd06551
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:30965570..30968218

Molecular Weight (calculated)

54016.7 Da

IEP (calculated)

9.073

GRAVY (calculated)

0.236

Length

507 amino acids

Sequence
(BLAST)

001: MAPRATVAMS RFPPVSSYDA AARERRTAAS DLDGTLLASS SAFPYYFLVA LEAGGYLRAL ALLLLAPFIL LLYSAVSEPA AIGLLVFATF AGLRVRDVEA
101: VARGVLPRHY AAGVRADSWE VFRGCGAGRR VVVTASPAVM VAPFVREFLG AEVAGTELGT CCGRFTGLIS GGVLVAGRKR EVVERLFAGG DMPDVGLGDR
201: ESDHDFMAIC KEAYMVPTNK RAPRAAADAL LSSVVFHDGR LVRRPDPAQA LFALVYLPVG FALAVLRVLI SLPVPPHLVR HTYRLTGIQL AVRGTPPPAP
301: REGSPGSLLV CNHRTALDPI IVAVALGRPV TCVTYSVSRL STAISPIPAV ALARDREADA ARIAALLNSG RDVVVCPEGT TCREPCLLRF SALFAELTDR
401: IVPVALEAAQ STYYGSTARG WKAMDPWFFY MNPRPGYKVT FLPALRPEET CGAGGRSAVD VANHVQAVIG KELGYRCTTL TRKDKYMKLA GNDGTVAADG
501: DDGKKLA

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.