Factsheet for TraesCS4B01G282100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid, secretory
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G280800.1	Wheat	peroxisome	98.2	98.2
TraesCS4A01G021500.1	Wheat	peroxisome	96.6	96.6
HORVU4Hr1G074470.4	Barley	plastid	97.4	92.94
Os03t0166600-00	Rice	cytosol	39.0	77.69
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	74.8	73.91
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	76.4	72.9
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	72.2	70.65
VIT_01s0026g01210.t01	Wine grape	plasma membrane	64.2	63.82
PGSC0003DMT400073428	Potato	cytosol	38.0	62.91
PGSC0003DMT400007387	Potato	plasma membrane	62.4	62.15
KRH33389	Soybean	plasma membrane	63.2	62.08
Solyc04g005840.1.1	Tomato	plasma membrane	61.8	61.92
KRG90133	Soybean	plasma membrane	63.2	61.72
PGSC0003DMT400003553	Potato	plasma membrane	59.0	61.46
TraesCS4B01G066500.1	Wheat	plasma membrane	66.8	61.28
Solyc02g087500.1.1	Tomato	plasma membrane	62.2	61.22
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	49.0	61.1
PGSC0003DMT400091384	Potato	plasma membrane	61.0	60.04
PGSC0003DMT400028782	Potato	plasma membrane	59.0	59.84
PGSC0003DMT400028781	Potato	plasma membrane	56.8	57.49
TraesCS6B01G051800.1	Wheat	mitochondrion	57.0	56.21
Solyc10g084900.1.1	Tomato	plasma membrane	54.2	55.76
PGSC0003DMT400028779	Potato	plasma membrane	24.6	54.91
TraesCS6B01G052300.1	Wheat	mitochondrion	55.4	54.53
TraesCS3B01G400000.1	Wheat	golgi	54.2	54.53
PGSC0003DMT400028775	Potato	plasma membrane	52.6	53.78
TraesCS1B01G292200.1	Wheat	plasma membrane	52.2	50.68
TraesCS1B01G287900.1	Wheat	golgi, peroxisome, plasma membrane	51.2	49.9
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	49.6	49.7
TraesCS5B01G092200.1	Wheat	plasma membrane	45.8	43.79
TraesCS3B01G371300.1	Wheat	mitochondrion, plasma membrane, plastid	44.8	41.79
TraesCS7B01G419500.1	Wheat	mitochondrion, plasma membrane	43.4	40.87
TraesCS1B01G233800.1	Wheat	plastid	38.6	39.39
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	42.2	39.37
TraesCS5B01G511500.1	Wheat	mitochondrion	43.4	38.41
TraesCS2B01G158000.1	Wheat	mitochondrion	40.0	37.88
TraesCS3B01G173200.1	Wheat	mitochondrion	39.6	36.8

Protein Annotations

Gene3D:1.20.1440.100	MapMan:26.9.3.2	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7	InterPro:Plipid/glycerol_acylTrfase
SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G282100	EnsemblPlants:TraesCS4B01G282100.1
TIGR:cd06551	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:565092269..565094325

Molecular Weight (calculated)

54266.8 Da

IEP (calculated)

9.481

GRAVY (calculated)

0.094

Length

500 amino acids

Sequence
(BLAST)

001: MVVASKEPFP AVRKCDASRR GDHTVVSDLD GTLLRSRSAF PYYALVAFEA GGVPRLALLL LLAPLAGLLY HAVSESAGVR MLVFAATAGA RVADIESAAR
101: AVLPRFYADD VHPDAWRVFT ACGRRWVVTA TPRVMAEPFL RDHLGADAVA GTELATWRGR ATGLVDSRRG VLVGERKAEA LREMVGDGDA PEVGLGDRRS
201: DYAFMSICKE AYLVPREPVD AVGADKLRKP VVFHDGRLVQ RPTPLAALLA VVWYPIGFLL ACVRVAAGSL VPMPWQYHVY RALGVRVVVR GAPPPRPKHA
301: EGRTGALFAC SHRTLLDPVF ISVALGRPVS VVTYSLSRLS EFLSPIRTVR LTRDRATDAA AIRRLLAGGD LVVCPEGTTC REPFLLRFSS LFAELSDDIV
401: PVATECRMSM FHGTTARGWK GMDPFYLFMN PRPQYTVTFL DRLPAEHTCG GGGRSSHEVA NHVQRLIASA LSFECTGFTR KDKYLALAGN DGVVGPSKGT

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.