Factsheet for TraesCS1B01G233800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G220600.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	93.27	91.4
TraesCS1D01G222100.1	Wheat	mitochondrion, plastid	90.61	91.36
TraesCS3A01G147200.1	Wheat	plastid	93.06	90.48
EES18528	Sorghum	mitochondrion	60.61	59.76
TraesCS2B01G158000.1	Wheat	mitochondrion	49.18	45.64
CDY71692	Canola	golgi, plasma membrane	28.37	45.13
Bra033323.1-P	Field mustard	endoplasmic reticulum, golgi	39.59	42.64
CDY15240	Canola	endoplasmic reticulum, golgi	39.59	42.64
CDX89973	Canola	endoplasmic reticulum, golgi	39.39	42.42
Bra036303.1-P	Field mustard	plasma membrane	39.18	42.11
CDY22016	Canola	plasma membrane	39.18	42.11
CDY07108	Canola	plasma membrane	38.78	41.67
VIT_07s0005g01760.t01	Wine grape	plasma membrane	44.29	41.49
KRH16642	Soybean	plasma membrane	41.22	40.64
KRH18844	Soybean	plasma membrane	41.63	40.56
KRH16640	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	41.63	40.4
TraesCS5B01G092200.1	Wheat	plasma membrane	43.06	40.34
KRH68291	Soybean	mitochondrion	41.22	39.69
TraesCS3B01G173200.1	Wheat	mitochondrion	43.27	39.41
Bra000903.1-P	Field mustard	mitochondrion, plasma membrane	41.63	39.23
KRH68289	Soybean	endoplasmic reticulum, plasma membrane	42.86	38.96
AT1G02390.1	Thale cress	plasma membrane	42.04	38.87
TraesCS3B01G371300.1	Wheat	mitochondrion, plasma membrane, plastid	42.45	38.81
TraesCS4B01G282100.1	Wheat	peroxisome	39.39	38.6
KRG96552	Soybean	plasma membrane	42.45	38.52
KRH69194	Soybean	golgi, plasma membrane, plastid	43.06	38.02
KRH31769	Soybean	golgi	43.06	37.95
AT4G01950.2	Thale cress	cytosol, golgi, peroxisome	41.63	37.23
TraesCS5B01G511500.1	Wheat	mitochondrion	42.86	37.17
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	40.61	37.13
TraesCS7B01G419500.1	Wheat	mitochondrion, plasma membrane	40.0	36.91
TraesCS1B01G292200.1	Wheat	plasma membrane	37.55	35.73
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	36.73	35.23
TraesCS3B01G400000.1	Wheat	golgi	35.71	35.21
TraesCS6B01G051800.1	Wheat	mitochondrion	36.33	35.11
TraesCS6B01G052300.1	Wheat	mitochondrion	36.33	35.04
TraesCS4B01G066500.1	Wheat	plasma membrane	38.37	34.5
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	27.76	33.92
TraesCS1B01G287900.1	Wheat	golgi, peroxisome, plasma membrane	31.84	30.41

Protein Annotations

EnsemblPlants:TraesCS1B01G233800.1	EnsemblPlantsGene:TraesCS1B01G233800	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	InterPro:Plipid/glycerol_acylTrfase	ncoils:Coil	PANTHER:PTHR15486	PANTHER:PTHR15486:SF19
PFAM:PF01553	SEG:seg	SMART:SM00563	SUPFAM:SSF69593	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr1B:-:419951462..419953190

Molecular Weight (calculated)

52671.2 Da

IEP (calculated)

8.765

GRAVY (calculated)

0.203

Length

490 amino acids

Sequence
(BLAST)

001: MSTGDRVVKS NLVTGLLRLS GTMPTMTAAP AVAPPACLLG NGTKTVVLEV DALLLKSSPP SAATLFPPFF LVAVEAGSFA RGLLLLALYP FLHLMTHAMC
101: VEAMVMVSFC GLRRDEAARI GRAVLPKYFS KEATRVEALG EAREAATGEV KAAAVSRSFP TVMVEAFLKD YAGFDAVIGR EVKGGYGYFA GVMDDGETYA
201: ERLRAALKRA EENTTYHYPK PMIFHDGRLA FTPTPAAALA MYVYLPFAVV LSVVRIAIYT LLPRRLIGPT AELAGVRVRV TGAPPATANG ESGASGGRLY
301: ACNHRTLLDP IAISSALGKP VFAVTYSLSR MSELLSPIPL LRLTRGRDED RCRMSSLLER GDVVVCPEGT TFREPYLLRF SPLFAELADE VSPVAVDERS
401: TMFYGTSTSS GAKCFDSVFF LMNPRPEYSV HFLEPVRTDN PRGSIEVANQ VQGVLAGALG FTPTALARKD KYLLLAGNEG VVSTKASKVI

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.