Factsheet for TraesCS1A01G220600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, plastid, extracellular

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion, plasma membrane, plastid
Any Predictor:	mitochondrion, plastid, secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G147200.1	Wheat	plastid	97.6	96.83
TraesCS1B01G233800.1	Wheat	plastid	91.4	93.27
TraesCS1D01G222100.1	Wheat	mitochondrion, plastid	90.0	92.59
TraesCS2A01G329800.1	Wheat	mitochondrion	73.0	72.13
EES18528	Sorghum	mitochondrion	61.4	61.77
TraesCS2A01G134500.1	Wheat	mitochondrion	50.2	47.63
CDY71692	Canola	golgi, plasma membrane	27.4	44.48
CDY15240	Canola	endoplasmic reticulum, golgi	38.0	41.76
Bra033323.1-P	Field mustard	endoplasmic reticulum, golgi	38.0	41.76
CDX89973	Canola	endoplasmic reticulum, golgi	37.8	41.54
VIT_07s0005g01760.t01	Wine grape	plasma membrane	43.0	41.11
Bra036303.1-P	Field mustard	plasma membrane	37.2	40.79
CDY22016	Canola	plasma membrane	37.2	40.79
TraesCS4A01G171600.1	Wheat	mitochondrion	36.6	40.76
KRH18844	Soybean	plasma membrane	40.6	40.36
CDY07108	Canola	plasma membrane	36.8	40.35
KRH16642	Soybean	plasma membrane	40.0	40.24
KRH16640	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	40.6	40.2
TraesCS3A01G146100.1	Wheat	mitochondrion	42.6	39.66
TraesCS5A01G086200.1	Wheat	plasma membrane	42.6	39.44
TraesCS3A01G339700.1	Wheat	mitochondrion	42.4	39.19
KRH68291	Soybean	mitochondrion	39.4	38.7
AT1G02390.1	Thale cress	plasma membrane	40.6	38.3
TraesCS4A01G021500.1	Wheat	peroxisome	38.2	38.2
Bra000903.1-P	Field mustard	mitochondrion, plasma membrane	39.6	38.08
TraesCS3A01G227400.1	Wheat	mitochondrion	40.8	38.06
KRH68289	Soybean	endoplasmic reticulum, plasma membrane	41.0	38.03
KRG96552	Soybean	plasma membrane	40.8	37.78
TraesCS4A01G361400.1	Wheat	mitochondrion	42.0	37.7
KRH31769	Soybean	golgi	41.8	37.59
KRH69194	Soybean	golgi, plasma membrane, plastid	41.4	37.3
TraesCS4A01G248400.1	Wheat	plasma membrane	38.0	37.11
AT4G01950.2	Thale cress	cytosol, golgi, peroxisome	40.2	36.68
TraesCS3A01G368400.1	Wheat	cytosol, peroxisome, plasma membrane	35.4	35.61
TraesCS1A01G283100.1	Wheat	plasma membrane	36.4	35.48
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	35.8	35.03
TraesCS6A01G037400.1	Wheat	endoplasmic reticulum	35.2	34.71
TraesCS2A01G015700.1	Wheat	mitochondrion	36.0	30.98
TraesCS1A01G278700.1	Wheat	plastid	31.0	28.34
TraesCS3A01G227500.1	Wheat	mitochondrion	11.2	22.58
TraesCS7A01G509500.1	Wheat	mitochondrion	11.6	21.56

Protein Annotations

EnsemblPlants:TraesCS1A01G220600.1	EnsemblPlantsGene:TraesCS1A01G220600	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	InterPro:Plipid/glycerol_acylTrfase	PANTHER:PTHR15486	PANTHER:PTHR15486:SF19	PFAM:PF01553
SEG:seg	SMART:SM00563	SUPFAM:SSF69593	TMHMM:TMhelix	MapMan:35.1	:

Description

No Description!

Coordinates

chr1A:-:389804662..389806164

Molecular Weight (calculated)

53651.6 Da

IEP (calculated)

8.833

GRAVY (calculated)

0.258

Length

500 amino acids

Sequence
(BLAST)

001: MSTGDGVVHR MLNLHRVVKS NLVAGLLRFI PTAPTMTAAP AVEPPACLLG NGIKTVVLEV DALLLKSSPP SAATLFPPFF LVAVEAGSFA RGLLLLALYP
101: FLHIMTHAMC VEAMVMVSFC GLRRDEAARI GRAVLPKYFS KEAARVEALG EAREATASEV KVAAASRSFP TVMVEAFLKD YVGFDAVIGM EVKAGHGYFA
201: GVMDGGETYA ERLRAALKRA EENTSYHYPK PMIFHDGRLA FTPTPAAALA MYVYFPFAVV LSVVRIAIYT LLPRRLIGPA AALAGVRVRV TGAPPAAANG
301: ESGASGGRLY ACNHRTLLDP IAISSALGKP VFAVTYSLSP LSELLSPIPL LRLTRGRDED RRRMSSLLER GDVVVCPEGT TCREPYLLRF SPLFAELADE
401: VSPVAVDERS TMFYGTSTSP GAKCLDSVFF LMNPRPEYSV HFLEPVRTDN PRGSIEVANQ VQGVLAGALG FTPTALTRKD KCLLLAGNEG VVSTKTSKVI

Best Arabidopsis Sequence Match ( AT1G02390.1 )
(BLAST)

001: MSGNKISTLQ ALVFFLYRFF ILRRWCHRSP KQKYQKCPSH GLHQYQDLSN HTLIFNVEGA LLKSNSLFPY FMVVAFEAGG VIRSLFLLVL YPFISLMSYE
101: MGLKTMVMLS FFGVKKESFR VGKSVLPKYF LEDVGLEMFQ VLKRGGKRVA VSDLPQVMID VFLRDYLEIE VVVGRDMKMV GGYYLGIVED KKNLEIAFDK
201: VVQEERLGSG RRLIGITSFN SPSHRSLFSQ FCQEIYFVRN SDKKSWQTLP QDQYPKPLIF HDGRLAVKPT PLNTLVLFMW APFAAVLAAA RLVFGLNLPY
301: SLANPFLAFS GIHLTLTVNN HNDLISADRK RGCLFVCNHR TLLDPLYISY ALRKKNMKAV TYSLSRLSEL LAPIKTVRLT RDRVKDGQAM EKLLSQGDLV
401: VCPEGTTCRE PYLLRFSPLF SEVCDVIVPV AIDSHVTFFY GTTASGLKAF DPIFFLLNPF PSYTVKLLDP VSGSSSSTCR GVPDNGKVNF EVANHVQHEI
501: GNALGFECTN LTRRDKYLIL AGNNGVVKKK

Arabidopsis Description

GPAT2Probable glycerol-3-phosphate acyltransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ22]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.