Factsheet for TraesCS3A01G227400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G225300.1	Wheat	mitochondrion, plasma membrane	94.96	94.96
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	93.66	93.66
HORVU3Hr1G056830.3	Barley	cytosol, plasma membrane	90.3	83.16
Zm00001d011430_P001	Maize	mitochondrion	75.19	72.35
Zm00001d044136_P001	Maize	mitochondrion	73.51	72.29
EES01127	Sorghum	mitochondrion	73.88	69.23
Os01t0631400-01	Rice	mitochondrion	42.16	68.48
TraesCS3A01G227500.1	Wheat	mitochondrion	31.53	68.15
TraesCS7A01G509500.1	Wheat	mitochondrion	33.77	67.29
GSMUA_Achr8P27070_001	Banana	plastid	54.29	52.81
VIT_12s0142g00040.t01	Wine grape	plasma membrane	51.68	51.87
KRH14479	Soybean	plasma membrane	51.31	50.93
KRH73656	Soybean	plasma membrane	50.93	50.65
PGSC0003DMT400044571	Potato	plasma membrane	49.81	49.08
KRG98920	Soybean	mitochondrion	48.13	48.96
Solyc07g056320.2.1	Tomato	plasma membrane	49.44	48.53
KRH46052	Soybean	mitochondrion, plasma membrane	47.95	48.22
GSMUA_Achr3P16480_001	Banana	mitochondrion	45.15	47.54
CDY10206	Canola	plasma membrane	48.32	45.68
CDY06647	Canola	plasma membrane	48.51	45.53
Bra015507.1-P	Field mustard	endoplasmic reticulum, plasma membrane	48.13	45.18
AT1G06520.1	Thale cress	plasma membrane	49.07	44.96
TraesCS4A01G021500.1	Wheat	peroxisome	40.86	43.8
TraesCS4A01G248400.1	Wheat	plasma membrane	41.6	43.55
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.86	42.86
TraesCS4A01G171600.1	Wheat	mitochondrion	35.45	42.32
TraesCS3A01G339700.1	Wheat	mitochondrion	41.79	41.4
TraesCS2A01G134500.1	Wheat	mitochondrion	40.49	41.18
TraesCS5A01G086200.1	Wheat	plasma membrane	41.42	41.11
TraesCS1A01G220600.1	Wheat	extracellular, mitochondrion, plasma membrane, plastid	38.06	40.8
TraesCS1A01G283100.1	Wheat	plasma membrane	38.99	40.74
TraesCS3A01G147200.1	Wheat	plastid	38.25	40.67
TraesCS3A01G146100.1	Wheat	mitochondrion	40.67	40.6
TraesCS4A01G361400.1	Wheat	mitochondrion	41.79	40.22
TraesCS3A01G368400.1	Wheat	cytosol, peroxisome, plasma membrane	37.13	40.04
TraesCS6A01G037400.1	Wheat	endoplasmic reticulum	37.31	39.45
TraesCS2A01G329800.1	Wheat	mitochondrion	36.38	38.54
TraesCS2A01G015700.1	Wheat	mitochondrion	38.81	35.8
TraesCS1A01G278700.1	Wheat	plastid	35.45	34.73

Protein Annotations

EnsemblPlants:TraesCS3A01G227400.1	EnsemblPlantsGene:TraesCS3A01G227400	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	InterPro:Plipid/glycerol_acylTrfase	PANTHER:PTHR15486	PANTHER:PTHR15486:SF44	PFAM:PF01553
PFAM:PF12710	SEG:seg	SMART:SM00563	SUPFAM:SSF69593	TMHMM:TMhelix	MapMan:5.2.1.3.1

Description

No Description!

Coordinates

chr3A:-:425210066..425218956

Molecular Weight (calculated)

58956.1 Da

IEP (calculated)

9.298

GRAVY (calculated)

0.165

Length

536 amino acids

Sequence
(BLAST)

001: MVLHAILPKV AVHWLINLYR AARKLRSNAF QYCRNSTTTT KPSTEAISSS ERTMPSAADR TVVCDFHGGL LRSTGIFPYF MLVAFEGGSP LRALVLLGFS
101: PLVWILGERS DAGVRIMTFV TFVGLRPRDA DLVARAVLPK FYMERLHAQV YDHLWLPAKR KVALTSTPRV MAECFLKEYM AANVVVGCEL QMVEVGRVLY
201: FTGLLCGSGS GPGLGQKALR EAFEADGNMA DVAVVGSSNP LDHLSAPYCK ELYVVSWESG ETARLPRERY PKPLIFHDGR LAFLPTAPAM LAFFLFLPLG
301: FILSVIRISI GIVLPYNISF AASALAGVCF RTSGRRVPEA GAKRRGVLFV CTHRTLVDPI MLTAALQKPV PAVTYSLSRL SEIIAPIKTV RLTRDRDHDA
401: AMMSRLLEQG DLAVCPEGTT CREPYLLRFS PLFAELADDM EPVALDAQVT SLYGTTASGH KWLDPVAFFA NPVPAYRVEF LGAVPRDQTR AGGRTSAEVA
501: NWVQRRLGEA LGFECTGLSR RDKYIMLAGN DGVVRK

Best Arabidopsis Sequence Match ( AT1G06520.1 )
(BLAST)

001: MVLPELLVIL AEWVLYRLLA KSCYRAARKL RGYGFQLKNL LSLSKTQSLH NNSQHHLHNH HQQNHPNQTL QDSLDPLFPS LTKYQELLLD KNRACSVSSD
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR

Arabidopsis Description

GPAT1Glycerol-3-phosphate acyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.