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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 5
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, mitochondrion, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015507.1-P Field mustard endoplasmic reticulum, plasma membrane 98.42 98.42
CDY10206 Canola plasma membrane 96.32 97.0
AT1G06520.1 Thale cress plasma membrane 86.87 84.79
VIT_12s0142g00040.t01 Wine grape plasma membrane 59.89 64.04
KRH73656 Soybean plasma membrane 60.25 63.82
KRH14479 Soybean plasma membrane 60.25 63.7
PGSC0003DMT400044571 Potato plasma membrane 57.97 60.85
Solyc07g056320.2.1 Tomato plasma membrane 57.62 60.26
KRG98920 Soybean mitochondrion 54.99 59.58
KRH46052 Soybean mitochondrion, plasma membrane 55.17 59.1
CDY71876 Canola cytosol, extracellular, mitochondrion 16.81 58.54
CDY71692 Canola golgi, plasma membrane 26.97 50.0
Zm00001d044136_P001 Maize mitochondrion 47.46 49.72
GSMUA_Achr8P27070_001 Banana plastid 47.81 49.55
TraesCS3A01G227400.1 Wheat mitochondrion 45.53 48.51
Zm00001d011430_P001 Maize mitochondrion 47.29 48.47
TraesCS3D01G225300.1 Wheat mitochondrion, plasma membrane 45.36 48.32
TraesCS3B01G257000.2 Wheat mitochondrion, plasma membrane 45.36 48.32
CDY71660 Canola cytosol, plasma membrane 23.29 48.19
CDX89973 Canola endoplasmic reticulum, golgi 37.65 47.25
CDY15240 Canola endoplasmic reticulum, golgi 37.48 47.03
TraesCS7B01G419500.1 Wheat mitochondrion, plasma membrane 43.61 46.89
TraesCS7D01G498800.1 Wheat mitochondrion 42.21 46.89
EES01127 Sorghum mitochondrion 46.23 46.15
CDY56848 Canola plasma membrane 32.57 45.7
CDY08528 Canola cytosol 32.4 45.68
CDY07108 Canola plasma membrane 35.9 44.96
CDY66042 Canola plasma membrane 32.05 44.85
CDY22016 Canola plasma membrane 35.38 44.3
CDY64226 Canola peroxisome 38.35 43.71
CDX93327 Canola golgi, peroxisome, plasma membrane 38.35 43.71
HORVU3Hr1G056830.3 Barley cytosol, plasma membrane 44.48 43.64
GSMUA_Achr3P16480_001 Banana mitochondrion 38.88 43.61
CDX74912 Canola peroxisome 38.18 43.51
Os01t0631400-01 Rice mitochondrion 25.04 43.33
CDY38016 Canola plasma membrane 37.3 42.18
CDY15166 Canola plasma membrane 36.78 41.75
CDY69719 Canola cytosol, golgi, peroxisome 31.17 41.69
CDY01076 Canola extracellular, plasma membrane 14.71 41.58
CDX90045 Canola plasma membrane 36.6 41.55
TraesCSU01G235900.1 Wheat extracellular, plasma membrane 21.54 41.14
CDY08476 Canola cytosol 8.93 40.8
CDY08475 Canola plasma membrane 30.3 39.41
TraesCS3D01G225400.1 Wheat mitochondrion 17.69 39.3
TraesCS3A01G227500.1 Wheat mitochondrion 16.46 37.9
CDX98902 Canola plasma membrane 35.9 36.8
CDY60435 Canola plasma membrane 36.08 36.4
TraesCS7A01G509500.1 Wheat mitochondrion 16.46 34.94
CDY22002 Canola mitochondrion 12.96 33.48
CDY56375 Canola mitochondrion 12.78 32.88
CDY01075 Canola cytosol, plasma membrane, plastid 8.23 29.94
Protein Annotations
EnsemblPlants:CDY06647EnsemblPlantsGene:GSBRNA2T00122809001GO:A0A078F0J7GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016740GO:GO:0016746InterPro:Plipid/glycerol_acylTrfasencoils:CoilPANTHER:PTHR15486
PANTHER:PTHR15486:SF44PFAM:PF01553ProteinID:CDY06647ProteinID:CDY06647.1SEG:segSignalP:SignalP-noTM
SMART:SM00563SUPFAM:SSF69593TMHMM:TMhelixUniParc:UPI0004EE7598MapMan:5.2.1.3.1:
Description
BnaA10g04260D
Coordinates
chrLK031972:-:34832..36644
Molecular Weight (calculated)
64429.7 Da
IEP (calculated)
9.229
GRAVY (calculated)
0.013
Length
571 amino acids
Sequence
(BLAST)
001: MVFPELLAIL AEWVLYRLLA NSCYRAARKL RGYGFQLKNF LNLSKSQSQH NTSHLLNNQQ QQQQQNQENQ DSINPLFPSI TKYENRTCSV SPDDTLVCDI
101: DGVLLRQLSS KHFHAFFPYF MLVAFEGGSI IRAIILLISC SFLWALPQET KLKVLTFITF SGLKVKDMDN VSRSVLPKFF LESLNLQVYN IWARTEYSKV
201: VFTTLPQVMV ERFLREHLNA DDVIGTKLQE IEVMGRKVYT GLTSGSLVKH RAAKDYFDNN NKKKPVLGIG SSSSVQDHTF ISLCKEAYVC NEEDSMNTLP
301: RERYPKPLIF HDGRLAFLPT PSATLAMFTW LPIGFFLAVF RILIGVLLPY HVANFLAAIS GVRITFKTHN LYNGPPEKGK SGVLYVCNHR TLLDPVFLTT
401: SLGKPLTAVT YSLSKFSELI APLKTVSLKR DRKKDGEAMH RLLSKGDLVV CPEGTTCREP YLLRFSPLFA ELTEDIVPVA VDARVSMFYG TTASGLKCLD
501: PIFFLMNPRP VYCIEILKKL PKEMTCAGGK SSFEVANFIQ GELARVLGFE CTNLTRKDKY LVLAGNEGIV K
Best Arabidopsis Sequence Match ( AT1G06520.1 )
(BLAST)
001: MVLPELLVIL AEWVLYRLLA KSCYRAARKL RGYGFQLKNL LSLSKTQSLH NNSQHHLHNH HQQNHPNQTL QDSLDPLFPS LTKYQELLLD KNRACSVSSD
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR
Arabidopsis Description
GPAT1Glycerol-3-phosphate acyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.