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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plasma membrane, peroxisome

Predictor Summary:
  • cytosol 1
  • golgi 2
  • extracellular 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane
Any Predictor:cytosol, golgi, peroxisome
BaCelLo:cytosol
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69719 Canola cytosol, golgi, peroxisome 83.43 97.89
CDY64226 Canola peroxisome 94.41 94.41
CDX74912 Canola peroxisome 94.21 94.21
AT2G38110.1 Thale cress cytosol, golgi, plasma membrane 91.42 91.42
VIT_08s0007g02000.t01 Wine grape golgi 79.24 79.56
KRH75836 Soybean cytosol, plasma membrane, plastid 77.45 78.86
KRH49307 Soybean plasma membrane 76.85 77.62
KRH66036 Soybean plasma membrane 76.05 76.51
KRH55439 Soybean plasma membrane 41.52 74.82
PGSC0003DMT400052335 Potato cytosol 74.65 73.91
Solyc09g014350.2.1 Tomato cytosol 73.45 73.02
KRG88817 Soybean plasma membrane 40.92 72.69
KRH00171 Soybean plastid 77.25 71.8
Zm00001d042813_P001 Maize plastid 66.47 70.7
Os01t0855000-01 Rice cytosol, peroxisome, plasma membrane 69.66 70.22
EES03906 Sorghum golgi, peroxisome, plasma membrane 69.86 69.58
GSMUA_Achr3P17610_001 Banana cytosol, golgi, plasma membrane 60.48 67.94
GSMUA_Achr10P... Banana plasma membrane 58.28 67.44
HORVU3Hr1G084990.1 Barley plasma membrane 66.27 66.8
TraesCS3D01G361300.1 Wheat golgi, plastid, unclear 66.27 66.8
TraesCS3B01G400000.1 Wheat golgi 66.27 66.8
TraesCS3A01G368400.1 Wheat cytosol, peroxisome, plasma membrane 66.27 66.8
CDY71876 Canola cytosol, extracellular, mitochondrion 20.96 64.02
CDX90045 Canola plasma membrane 62.87 62.62
CDY15166 Canola plasma membrane 62.87 62.62
CDY38016 Canola plasma membrane 62.87 62.38
HORVU1Hr1G073340.2 Barley plasma membrane 61.48 61.6
GSMUA_Achr10P... Banana plasma membrane 60.68 60.8
CDY22002 Canola mitochondrion 26.55 60.18
Zm00001d010078_P001 Maize plasma membrane 57.88 59.67
Os05t0448300-01 Rice plasma membrane 57.48 59.26
CDY56375 Canola mitochondrion 26.15 59.01
KXG22121 Sorghum endoplasmic reticulum, golgi, plasma membrane 59.48 58.43
TraesCS1B01G287900.1 Wheat golgi, peroxisome, plasma membrane 59.28 57.89
TraesCS1A01G278700.1 Wheat plastid 61.68 56.49
TraesCS1D01G278000.1 Wheat plasma membrane, plastid 62.08 56.44
CDY71660 Canola cytosol, plasma membrane 28.54 51.81
CDY56848 Canola plasma membrane 39.72 48.89
CDY08476 Canola cytosol 12.18 48.8
CDY08528 Canola cytosol 38.72 47.9
CDY66042 Canola plasma membrane 37.33 45.83
CDY01076 Canola extracellular, plasma membrane 18.16 45.05
CDY08475 Canola plasma membrane 37.13 42.37
CDY71692 Canola golgi, plasma membrane 25.75 41.88
CDX98902 Canola plasma membrane 45.31 40.75
CDY60435 Canola plasma membrane 45.31 40.11
CDX89973 Canola endoplasmic reticulum, golgi 35.33 38.9
CDY15240 Canola endoplasmic reticulum, golgi 35.13 38.68
CDY06647 Canola plasma membrane 43.71 38.35
CDY10206 Canola plasma membrane 43.31 38.27
CDY22016 Canola plasma membrane 33.73 37.06
CDY07108 Canola plasma membrane 33.13 36.4
CDY01075 Canola cytosol, plasma membrane, plastid 10.18 32.48
Protein Annotations
MapMan:21.9.1.5.1Gene3D:3.40.50.1000MapMan:5.2.1.2.2GO:A0A078DWM9EnsemblPlants:CDX93327ProteinID:CDX93327
ProteinID:CDX93327.1ncoils:CoilGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016740GO:GO:0016746EnsemblPlantsGene:GSBRNA2T00155302001
InterPro:HAD-like_sfInterPro:HAD_sfInterPro:IPR023214PFAM:PF01553PFAM:PF12710PANTHER:PTHR15486
PANTHER:PTHR15486:SF27InterPro:Plipid/glycerol_acylTrfaseSMART:SM00563SUPFAM:SSF56784SUPFAM:SSF69593TMHMM:TMhelix
UniParc:UPI0004EDE9B3SEG:seg::::
Description
BnaC04g45690D
Coordinates
chrLK031875:+:1093887..1096944
Molecular Weight (calculated)
55924.8 Da
IEP (calculated)
10.080
GRAVY (calculated)
0.063
Length
501 amino acids
Sequence
(BLAST)
001: MGAQEKRRRF QPITSYEIKD RSNQTVTADL DGTLLISRSS FPYYFLMALE AGSLLRALIL LASVPFVYLT YLSVSETLAI NIFIFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDAWSIF NTFGKRYIVT ASPRVMVEPF VKTYLGVNKV LGTELEVSKS GRATGFVRRP GVLVGQHKRD AILREFGGVA SGLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LNPIIFHEGR LVQRPTPLVA LLTLLWLPVG FLVSLIRVYT NIPLPERIAR YNYKLTGIKL VVNGNPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS VFNGTTTRGY KFLDPYFAFM NPVPTFEITF LKQLPAELTC KGGKSPIEVA NYIQRVLAGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: I
Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)
001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T
Arabidopsis Description
GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [cytosol,plasma membrane,golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.