Factsheet for Zm00001d010078_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22121	Sorghum	endoplasmic reticulum, golgi, plasma membrane	87.04	82.94
Os05t0448300-01	Rice	plasma membrane	71.19	71.19
HORVU1Hr1G073340.2	Barley	plasma membrane	72.02	70.0
Zm00001d042813_P001	Maize	plastid	64.2	66.24
TraesCS1B01G287900.1	Wheat	golgi, peroxisome, plasma membrane	69.55	65.89
TraesCS1A01G278700.1	Wheat	plastid	71.81	63.8
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	72.02	63.52
CDY69719	Canola	cytosol, golgi, peroxisome	52.88	60.19
VIT_08s0007g02000.t01	Wine grape	golgi	61.32	59.72
CDY64226	Canola	peroxisome	60.29	58.48
Bra017137.1-P	Field mustard	cytosol, golgi, peroxisome	60.08	58.28
Bra005137.1-P	Field mustard	peroxisome	60.08	58.28
CDX74912	Canola	peroxisome	59.88	58.08
AT2G38110.1	Thale cress	cytosol, golgi, plasma membrane	59.88	58.08
KRH75836	Soybean	cytosol, plasma membrane, plastid	58.64	57.93
CDX93327	Canola	golgi, peroxisome, plasma membrane	59.67	57.88
KRH49307	Soybean	plasma membrane	59.05	57.86
GSMUA_Achr10P...	Banana	plasma membrane	50.82	57.04
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	52.26	56.95
KRH66036	Soybean	plasma membrane	57.82	56.43
PGSC0003DMT400052335	Potato	cytosol	56.38	54.15
Solyc09g014350.2.1	Tomato	cytosol	55.97	53.97
KRH00171	Soybean	plastid	59.67	53.8
KRH55439	Soybean	plasma membrane	29.22	51.08
GSMUA_Achr10P...	Banana	plasma membrane	51.23	49.8
KRG88817	Soybean	plasma membrane	28.81	49.65
Zm00001d014984_P001	Maize	endoplasmic reticulum	52.26	49.32
Zm00001d033915_P001	Maize	plasma membrane	51.65	49.12
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	51.03	47.6
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	49.18	47.23
Zm00001d010520_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	42.18	41.16
Zm00001d038366_P001	Maize	plasma membrane	41.98	39.84
Zm00001d049616_P001	Maize	plasma membrane	35.8	35.08
Zm00001d044136_P001	Maize	mitochondrion	37.86	33.76
Zm00001d007714_P001	Maize	plasma membrane	36.21	33.52
Zm00001d034732_P001	Maize	mitochondrion	35.39	32.03
Zm00001d011430_P001	Maize	mitochondrion	36.21	31.6
Zm00001d040265_P001	Maize	endoplasmic reticulum, plasma membrane	35.19	31.55
Zm00001d041596_P001	Maize	plastid	37.65	30.76

Protein Annotations

Gene3D:1.20.1440.100	EntrezGene:100382119	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	ProteinID:AQK93400.1	EMBL:BT063237
UniProt:C0P4L8	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740
GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF01553	PFAM:PF12710
PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593
UniParc:UPI0001948F94	EnsemblPlantsGene:Zm00001d010078	EnsemblPlants:Zm00001d010078_P001	EnsemblPlants:Zm00001d010078_T001	SEG:seg	:

Description

Glycerol-3-phosphate 2-O-acyltransferase 6

Coordinates

chr8:+:98490114..98492460

Molecular Weight (calculated)

52958.5 Da

IEP (calculated)

8.800

GRAVY (calculated)

0.157

Length

486 amino acids

Sequence
(BLAST)

001: MVSRRFKPIE LCDSEGRSRQ TVAADLDGTL LLSRSAFPYY LLIALEAGSL LRAVALLLSV PLVYLTYVTV SETLAVRAFI YVAMAGLEAR DIEAVARSVL
101: PSFYAGDVHP EGWRVFRSFG RRCVVTASPR LMVEPFAKAF LGADVVIGTE VEVAQSGKAT GFVAGPGVLV GEHKRRAVAR EFGDSLPDVG MGDRESDFDF
201: MSICKEAYTV TRQKYRALPR DQLQGRAILH DGRLARRPTA TNALLTFLWM PLGFALALVR AHLHLLLPVR ALAYAYKLTG VKLVVRGNRP PPSKKKKGDQ
301: LGVLFVCNHR STLDAVAVGV ALGRKVRWVV TDGGAGASRF SEPVVSPIMT GVPLPVPTSL EGDADADAAP RIRRLLEEGD DVVVFPEGAI CREPFLLRFG
401: ALFAEVTDRI VPVAIEPRES MFHGSTARGL RGMDPYFFFM NPRPTYEVTF LNQLPGELTC GGGRSPVEVA SYVQEVLAAQ LGFECT

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.