Factsheet for Zm00001d044136_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011430_P001	Maize	mitochondrion	89.36	87.43
EES01127	Sorghum	mitochondrion	88.62	84.44
TraesCS3D01G225300.1	Wheat	mitochondrion, plasma membrane	72.29	73.51
TraesCS3A01G227400.1	Wheat	mitochondrion	72.29	73.51
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	71.19	72.39
Os01t0631400-01	Rice	mitochondrion	42.2	69.7
TraesCS7D01G498800.1	Wheat	mitochondrion	65.69	69.65
TraesCS7B01G419500.1	Wheat	mitochondrion, plasma membrane	66.97	68.74
HORVU3Hr1G056830.3	Barley	cytosol, plasma membrane	71.56	67.01
TraesCS3D01G225400.1	Wheat	mitochondrion	28.62	60.7
TraesCSU01G235900.1	Wheat	extracellular, plasma membrane	32.66	59.53
TraesCS3A01G227500.1	Wheat	mitochondrion	26.61	58.47
TraesCS7A01G509500.1	Wheat	mitochondrion	28.26	57.25
VIT_12s0142g00040.t01	Wine grape	plasma membrane	52.84	53.93
GSMUA_Achr8P27070_001	Banana	plastid	53.03	52.45
KRH14479	Soybean	plasma membrane	51.74	52.22
KRH73656	Soybean	plasma membrane	51.38	51.95
KRG98920	Soybean	mitochondrion	49.36	51.04
PGSC0003DMT400044571	Potato	plasma membrane	50.64	50.74
KRH46052	Soybean	mitochondrion, plasma membrane	49.17	50.28
Solyc07g056320.2.1	Tomato	plasma membrane	50.09	50.0
GSMUA_Achr3P16480_001	Banana	mitochondrion	45.5	48.72
CDY10206	Canola	plasma membrane	49.54	47.62
CDY06647	Canola	plasma membrane	49.72	47.46
Bra015507.1-P	Field mustard	endoplasmic reticulum, plasma membrane	49.17	46.94
AT1G06520.1	Thale cress	plasma membrane	49.17	45.81
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	41.83	43.76
Zm00001d033915_P001	Maize	plasma membrane	40.92	43.64
Zm00001d007714_P001	Maize	plasma membrane	42.02	43.62
Zm00001d040265_P001	Maize	endoplasmic reticulum, plasma membrane	42.94	43.17
Zm00001d049616_P001	Maize	plasma membrane	39.27	43.15
Zm00001d010520_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	39.08	42.77
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	39.45	42.49
Zm00001d038366_P001	Maize	plasma membrane	39.45	41.99
Zm00001d034732_P001	Maize	mitochondrion	40.92	41.53
Zm00001d014984_P001	Maize	endoplasmic reticulum	39.08	41.36
Zm00001d042813_P001	Maize	plastid	34.86	40.34
Zm00001d041596_P001	Maize	plastid	43.3	39.66
Zm00001d010078_P001	Maize	plasma membrane	33.76	37.86

Protein Annotations

EntrezGene:100382183	MapMan:5.2.1.3.1	EMBL:BT063440	UniProt:C0P571	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	ProteinID:ONM40026.1	PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF44
InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI0001948EF0	EnsemblPlantsGene:Zm00001d044136
EnsemblPlants:Zm00001d044136_P001	EnsemblPlants:Zm00001d044136_T001	SEG:seg	:	:	:

Description

Glycerol-3-phosphate acyltransferase 1

Coordinates

chr3:-:220098352..220104557

Molecular Weight (calculated)

60125.9 Da

IEP (calculated)

9.843

GRAVY (calculated)

0.183

Length

545 amino acids

Sequence
(BLAST)

001: MVFPAILPKV AVRLLFTFYR AARKLRRHAF QLYNRRTAAK PPSFSVSQQQ AGAATFKTDA AIPDAAGRTV VCDVHGALLR SSALFPYFMV VAYEGGSLLR
101: AMLLLCAFPL VWALGERSGG AGAVRVMAFV TFAGLRPRDM DLVGRAVLPK HYMEQLNALV YGSLWLPARR KVAVTGAPRV MSEWFLKEYL AADAVVGLEL
201: QLVTVGRCRY FTGLLSGPAT GPELRHKALM EALGAEDDTV ADVGIISNSN PLDHLFVPYC KEVYVVNTEN DKLPRVKYPK PLIFHDGRLA FLPTPAAMLA
301: FFLFLPLGVI LSVIRINIGI VLPYKVNFVA AAIFGVRFRA SGLRAPPADG EQRRGVLYVC THRTLVDPIM LTTALQKPVP ALTYSLSRLS ELIAPIKTVR
401: LTRDRARDAD TMSRLLKQGD LAVCPEGTTC REPYLLRFSP LFAELADDME PVALDAQVTM LYGTTASGHK WLDPVAFFAN PVPSYRVEFL GTVPREWTRA
501: GGRTGVEVAN WVQRRLGEAL EFECTELTRR DKYMMLAGND GVVAK

Best Arabidopsis Sequence Match ( AT1G06520.1 )
(BLAST)

001: MVLPELLVIL AEWVLYRLLA KSCYRAARKL RGYGFQLKNL LSLSKTQSLH NNSQHHLHNH HQQNHPNQTL QDSLDPLFPS LTKYQELLLD KNRACSVSSD
101: HYRDTFFCDI DGVLLRQHSS KHFHTFFPYF MLVAFEGGSI IRAILLLLSC SFLWTLQQET KLRVLSFITF SGLRVKDMDN VSRSVLPKFF LENLNIQVYD
201: IWARTEYSKV VFTSLPQVLV ERFLREHLNA DDVIGTKLQE IKVMGRKFYT GLASGSGFVL KHKSAEDYFF DSKKKPALGI GSSSSPQDHI FISICKEAYF
301: WNEEESMSKN NALPRERYPK PLIFHDGRLA FLPTPLATLA MFIWLPIGFL LAVFRISVGV FLPYHVANFL ASMSGVRITF KTHNLNNGRP EKGNSGVLYV
401: CNHRTLLDPV FLTTSLGKPL TAVTYSLSKF SEFIAPLKTV SLKRDRKKDG EAMQRLLSKG DLVVCPEGTT CREPYLLRFS PLFAELTEDI VPVAVDARVS
501: MFYGTTASGL KCLDPIFFLM NPRPVYCLEI LKKLPKEMTC AGGKSSFEVA NFIQGELARV LGFECTNLTR RDKYLVLAGN EGIVR

Arabidopsis Description

GPAT1Glycerol-3-phosphate acyltransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SHJ5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.