Factsheet for Zm00001d041596_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG23710	Sorghum	plastid	79.5	78.44
TraesCS5B01G092200.1	Wheat	plasma membrane	60.5	68.83
TraesCS5D01G099700.1	Wheat	plasma membrane	61.85	68.66
TraesCS5A01G086200.1	Wheat	plasma membrane	61.34	67.59
Os12t0563000-00	Rice	mitochondrion	61.85	62.37
Zm00001d007714_P001	Maize	plasma membrane	53.78	60.95
CDY71692	Canola	golgi, plasma membrane	25.21	48.7
Zm00001d034732_P001	Maize	mitochondrion	42.86	47.49
Zm00001d040265_P001	Maize	endoplasmic reticulum, plasma membrane	42.52	46.68
Bra036303.1-P	Field mustard	plasma membrane	34.96	45.61
CDY22016	Canola	plasma membrane	34.96	45.61
CDY07108	Canola	plasma membrane	34.62	45.18
CDY15240	Canola	endoplasmic reticulum, golgi	34.45	45.05
Bra033323.1-P	Field mustard	endoplasmic reticulum, golgi	34.29	44.84
CDX89973	Canola	endoplasmic reticulum, golgi	34.12	44.62
KRH68291	Soybean	mitochondrion	38.15	44.6
VIT_07s0005g01760.t01	Wine grape	plasma membrane	38.32	43.59
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	37.98	43.38
Zm00001d044136_P001	Maize	mitochondrion	39.66	43.3
KRH68289	Soybean	endoplasmic reticulum, plasma membrane	39.16	43.23
HORVU5Hr1G022500.1	Barley	cytosol	39.16	42.83
KRG96552	Soybean	plasma membrane	38.82	42.78
Zm00001d049616_P001	Maize	plasma membrane	35.63	42.74
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	36.3	42.69
KRH16640	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	35.97	42.38
KRH18844	Soybean	plasma membrane	35.8	42.35
KRH16642	Soybean	plasma membrane	35.29	42.25
Zm00001d014984_P001	Maize	endoplasmic reticulum	36.13	41.75
KRH69194	Soybean	golgi, plasma membrane, plastid	38.82	41.62
Zm00001d011430_P001	Maize	mitochondrion	38.82	41.47
KRH31769	Soybean	golgi	38.66	41.37
Bra000903.1-P	Field mustard	mitochondrion, plasma membrane	35.97	41.15
Zm00001d033915_P001	Maize	plasma membrane	34.96	40.7
AT4G01950.2	Thale cress	cytosol, golgi, peroxisome	37.48	40.69
AT1G02390.1	Thale cress	plasma membrane	35.97	40.38
Zm00001d010520_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	33.45	39.96
Zm00001d038366_P001	Maize	plasma membrane	33.45	38.87
Zm00001d042813_P001	Maize	plastid	30.59	38.64
Zm00001d010078_P001	Maize	plasma membrane	30.76	37.65

Protein Annotations

EnsemblPlants:Zm00001d041596_P001	EnsemblPlants:Zm00001d041596_T001	EnsemblPlantsGene:Zm00001d041596	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:Plipid/glycerol_acylTrfase	PANTHER:PTHR15486	PANTHER:PTHR15486:SF29
PFAM:PF01553	ProteinID:ONM33332.1	SEG:seg	SMART:SM00563	SUPFAM:SSF69593	UniParc:UPI00084344CC
UniProt:A0A1D6MX77	MapMan:35.1	:	:	:	:

Description

Probable glycerol-3-phosphate acyltransferase 2

Coordinates

chr3:+:129159709..129161496

Molecular Weight (calculated)

63597.8 Da

IEP (calculated)

9.705

GRAVY (calculated)

0.261

Length

595 amino acids

Sequence
(BLAST)

001: MAWKMLPAAS ELFPAIVRAG TATPPRPQPP AARNSPSPTV HRHAPPAARL GSAGTVLVVD VDGALLLSRS LFPYFMLVAL EAGSFLRGLV LLLLYPAIRC
101: CYCCLGGGDL AVRAMAAVAF CGLRARTFRA GRAVLPRWLL EDVAAEALEA ARRVGDPARV VWASAMPRVM VEPFLREYLQ VPAAAAVAAR EMKTAWGFYT
201: GLMEGGGEDC EATMALMTKR TSAGEGAGDV VGFSAARSVA FLSSSPLAST CKVVLLVSRV ACFDHQSHAR STAMCLLLLL TTTTISLQEV YVVCPEEKSK
301: WRRLARRDYP TPLVFHDGRL AFLPTPLNTV AMFTWLPLGA ALAILRLAVA LALPYKVATA LLAATGQSWR LRGSLPPPGN SGGSGQLYAC NHRTLIDPVY
401: VSIALDRPVR AVSYSLSRVS DLISPIGATV RLARDRARDG AAMARLLARG DSVVVCPEGT TCREPYLLRF SPLFAELGGA GGVVPVALAA EASMFYGTTA
501: SGWKAADPFY FLCNPRVCYT VQFLKRVDTA DVAGDGKKKK AAASSVDVAN RVQRLIADAL GYECTMLTRK DKYLMLVGND GAVAAPRCRQ RQVTN

Best Arabidopsis Sequence Match ( AT4G01950.1 )
(BLAST)

001: MSAKISIFQA LVFLFYRFIL RRYRNSKPKY QNGPSSLLQS DLSRHTLIFN VEGALLKSDS LFPYFMLVAF EAGGVIRSFL LFILYPLISL MSHEMGVKVM
101: VMVSFFGIKK EGFRAGRAVL PKYFLEDVGL EMFEVLKRGG KKIGVSDDLP QVMIEGFLRD YLEIDVVVGR EMKVVGGYYL GIMEDKTKHD LVFDELVRKE
201: RLNTGRVIGI TSFNTSLHRY LFSQFCQEIY FVKKSDKRSW QTLPRSQYPK PLIFHDGRLA IKPTLMNTLV LFMWGPFAAA AAAARLFVSL CIPYSLSIPI
301: LAFSGCRLTV TNDYVSSQKQ KPSQRKGCLF VCNHRTLLDP LYVAFALRKK NIKTVTYSLS RVSEILAPIK TVRLTRDRVS DGQAMEKLLT EGDLVVCPEG
401: TTCREPYLLR FSPLFTEVSD VIVPVAVTVH VTFFYGTTAS GLKALDPLFF LLDPYPTYTI QFLDPVSGAT CQDPDGKLKF EVANNVQSDI GKALDFECTS
501: LTRKDKYLIL AGNNGVVKKN

Arabidopsis Description

ATGPAT3glycerol-3-phosphate acyltransferase 3 [Source:TAIR;Acc:AT4G01950]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.