Factsheet for Zm00001d027810_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	91.5	88.36
TraesCS4D01G280800.1	Wheat	peroxisome	74.7	75.6
TraesCS4B01G282100.1	Wheat	peroxisome	73.91	74.8
Os03t0166600-00	Rice	cytosol	36.96	74.5
TraesCS4A01G021500.1	Wheat	peroxisome	73.52	74.4
HORVU4Hr1G074470.4	Barley	plastid	74.7	72.14
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	72.92	70.83
Zm00001d033915_P001	Maize	plasma membrane	64.62	63.99
PGSC0003DMT400073428	Potato	cytosol	37.15	62.25
PGSC0003DMT400007387	Potato	plasma membrane	60.28	60.76
VIT_01s0026g01210.t01	Wine grape	plasma membrane	60.08	60.44
KRH33389	Soybean	plasma membrane	60.67	60.31
KRG90133	Soybean	plasma membrane	60.87	60.16
Solyc04g005840.1.1	Tomato	plasma membrane	59.29	60.12
PGSC0003DMT400003553	Potato	plasma membrane	56.13	59.17
Solyc02g087500.1.1	Tomato	plasma membrane	58.89	58.66
PGSC0003DMT400091384	Potato	plasma membrane	57.91	57.68
PGSC0003DMT400028782	Potato	plasma membrane	54.94	56.39
PGSC0003DMT400028781	Potato	plasma membrane	53.95	55.26
Solyc10g084900.1.1	Tomato	plasma membrane	50.2	52.26
Zm00001d042813_P001	Maize	plastid	48.22	51.8
Zm00001d014984_P001	Maize	endoplasmic reticulum	52.57	51.65
PGSC0003DMT400028779	Potato	plasma membrane	22.73	51.34
PGSC0003DMT400028775	Potato	plasma membrane	48.62	50.31
Zm00001d010078_P001	Maize	plasma membrane	47.23	49.18
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	47.43	48.1
Zm00001d010520_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	47.04	47.79
Zm00001d038366_P001	Maize	plasma membrane	46.44	45.9
Zm00001d049616_P001	Maize	plasma membrane	42.29	43.15
Zm00001d044136_P001	Maize	mitochondrion	42.49	39.45
Zm00001d011430_P001	Maize	mitochondrion	42.89	38.96
Zm00001d007714_P001	Maize	plasma membrane	39.92	38.48
Zm00001d040265_P001	Maize	endoplasmic reticulum, plasma membrane	41.11	38.38
Zm00001d034732_P001	Maize	mitochondrion	40.12	37.8
Zm00001d041596_P001	Maize	plastid	42.69	36.3

Protein Annotations

Gene3D:1.20.1440.100	EntrezGene:103631765	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	UniProt:A0A1D6JPX5	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016746	InterPro:HAD_sf	InterPro:IPR023214	ProteinID:ONL94044.1	PFAM:PF01553
PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF69593
TMHMM:TMhelix	UniParc:UPI0002217694	EnsemblPlantsGene:Zm00001d027810	EnsemblPlants:Zm00001d027810_P001	EnsemblPlants:Zm00001d027810_T001	SEG:seg

Description

Glycerol-3-phosphate acyltransferase 5

Coordinates

chr1:-:14247874..14250263

Molecular Weight (calculated)

54823.7 Da

IEP (calculated)

9.513

GRAVY (calculated)

0.235

Length

506 amino acids

Sequence
(BLAST)

001: MHAMAWWGGE EGEPLFPSVD KCDASRLGRD STLVADLDGA LLRSPDAFPY YALVAFETGG AARLALLLLL APLAAALRRA VSESAGERVL VFAATAGARV
101: ANVESAARAV LPRFYAADVR RDAWRVFSAC GGRRLVLTAA PRVMAEPFLR RYLGADAVAG TELAAWRGRA TGWVDARRGG VLVGESKAQA LRQMLDAGEV
201: PDVGLGHRRS DYAFMSFCKE AYLVPRTPVE AVRADELPKR VVFHDGRLVQ RPTPLVALLT VLWFPVGLLL SLVRVAAGVL LPMRWLRVAF HALGVRVVVR
301: GTPAAAAAAA TRTGVLFACS HRTLLDAVFL SVALGRPVAA VTYSLSRLSE FLSPIRTVRL TRDRAADAAT IGRVLAEGDL AICPEGTTCR EPFLLRFSAL
401: FAELTDAVVP VAVECRMGMF HGTTARGWKG MDPFYFFMNP SPVYTITFLD RLPPELTCGG GNKSGHWVAN YVQRLIASTL SYECTGLTRK DKYRELADND
501: GLVLNF

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.