Factsheet for VIT_01s0026g01210.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007387	Potato	plasma membrane	84.69	84.86
Solyc04g005840.1.1	Tomato	plasma membrane	83.9	84.57
KRH33389	Soybean	plasma membrane	82.7	81.73
KRG90133	Soybean	plasma membrane	82.7	81.25
TraesCS4A01G248400.1	Wheat	plasma membrane	75.75	74.41
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	75.55	74.36
EER90914	Sorghum	plasma membrane	74.55	74.26
Zm00001d033915_P001	Maize	plasma membrane	74.16	72.99
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	73.76	69.87
TraesCS4B01G066500.1	Wheat	plasma membrane	75.15	69.36
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	54.27	68.08
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	68.99	67.91
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	67.59	66.54
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	67.2	66.14
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	67.2	66.14
EER91628	Sorghum	cytosol	67.59	65.64
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	67.79	65.45
TraesCS4D01G280800.1	Wheat	peroxisome	64.02	64.4
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	63.82	64.33
TraesCS4B01G282100.1	Wheat	peroxisome	63.82	64.2
TraesCS4A01G021500.1	Wheat	peroxisome	63.62	64.0
HORVU4Hr1G074470.4	Barley	plastid	64.02	61.45
HORVU1Hr1G032150.4	Barley	peroxisome	65.81	61.3
HORVU4Hr1G011110.4	Barley	plastid	75.15	60.58
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	60.44	60.08
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	61.63	59.16
VIT_08s0007g02000.t01	Wine grape	golgi	57.65	58.12
TraesCS2A01G015700.1	Wheat	mitochondrion	67.0	58.0
Os10t0413400-00	Rice	plastid	67.99	55.43
VIT_13s0019g01990.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	52.09	53.8
Os03t0166600-00	Rice	cytosol	26.44	52.99
VIT_15s0046g02400.t01	Wine grape	plasma membrane	52.68	52.89
GSMUA_Achr5P14930_001	Banana	plasma membrane	66.0	45.36
VIT_12s0142g00040.t01	Wine grape	plasma membrane	47.32	44.57
VIT_07s0005g01760.t01	Wine grape	plasma membrane	40.36	38.81

Protein Annotations

EntrezGene:100243321	wikigene:100243321	MapMan:26.9.3.2	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	ProteinID:CCB56607
ProteinID:CCB56607.1	UniProt:F6HPH9	EMBL:FN596002	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010143	GO:GO:0016020
GO:GO:0016021	GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	GO:GO:0016787	GO:GO:0016791
GO:GO:0090447	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	EntrezGene:LOC100243321	wikigene:LOC100243321
PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563
SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI00015CB051	ArrayExpress:VIT_01s0026g01210	EnsemblPlantsGene:VIT_01s0026g01210
EnsemblPlants:VIT_01s0026g01210.t01	RefSeq:XP_002268513	RefSeq:XP_002268513.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1:-:10214817..10216769

Molecular Weight (calculated)

55147.0 Da

IEP (calculated)

9.297

GRAVY (calculated)

0.254

Length

503 amino acids

Sequence
(BLAST)

001: MAVTTFPTVD QCQSIGREKH TVVADMDGTL LIGRSSFPYF ALVAFEGGGV LRLLFLLLAS PLAGLLYYFV SESAGIQILI FVTFAGMKVS DIESVARAVL
101: PKFYLSDLHP ESWRVFSSCG KRCVLTANPR IMVEAFLKDF LGADLVLGTE IATYKGRATG FVCDPGVLVG KNKAYALNKT FGETQPEIGL GDRHTDFPFM
201: ASCKEGYIVA AKPEVKAVTS DKLPKPIIFH DSRLVQKPTP LTALLTLLWI PIGFALACLR IAAGSLLPMR IVYHAFWALG VRVSVKGSPP PVAKKSIGQS
301: GVLFICSHRT LLDPIFLSAA LGRPIPAVTY SVSRLSEFIS PIKTIRLSRD RVKDAAMIKK LLEEGDLAIC PEGTTCREPF LLRFSALFAE LTDQLVPVAM
401: MNRMSMFHGT TARGWKGMDP FFFFMNPSPA YEVTFLNKLP LELTCSSGKS SHEVANYMQR VIAATLSYEC TSFTRKDKYR ALAGNDGTVP KKPLLYPDKV
501: MGC

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.