Factsheet for TraesCS2B01G319100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90914	Sorghum	plasma membrane	80.8	64.16
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	81.05	63.6
TraesCS4B01G066500.1	Wheat	plasma membrane	85.54	62.94
Zm00001d033915_P001	Maize	plasma membrane	79.8	62.62
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	78.3	59.13
PGSC0003DMT400028779	Potato	plasma membrane	32.42	58.04
TraesCS2A01G015700.1	Wheat	mitochondrion	81.55	56.28
VIT_01s0026g01210.t01	Wine grape	plasma membrane	68.08	54.27
PGSC0003DMT400007387	Potato	plasma membrane	67.58	53.98
Solyc04g005840.1.1	Tomato	plasma membrane	66.58	53.51
PGSC0003DMT400003553	Potato	plasma membrane	62.34	52.08
KRH33389	Soybean	plasma membrane	65.84	51.87
PGSC0003DMT400091384	Potato	plasma membrane	65.34	51.57
KRG90133	Soybean	plasma membrane	65.84	51.56
Solyc02g087500.1.1	Tomato	plasma membrane	64.59	50.98
PGSC0003DMT400028782	Potato	plasma membrane	60.85	49.49
TraesCS4B01G282100.1	Wheat	peroxisome	61.1	49.0
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	60.85	47.75
PGSC0003DMT400028781	Potato	plasma membrane	57.86	46.96
PGSC0003DMT400028775	Potato	plasma membrane	55.86	45.81
Solyc10g084900.1.1	Tomato	plasma membrane	55.36	45.68
PGSC0003DMT400073428	Potato	cytosol	32.42	43.05
TraesCS3B01G400000.1	Wheat	golgi	49.13	39.64
TraesCS1B01G287900.1	Wheat	golgi, peroxisome, plasma membrane	47.63	37.23
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	45.64	36.67
TraesCS6B01G051800.1	Wheat	mitochondrion	46.13	36.49
TraesCS6B01G052300.1	Wheat	mitochondrion	45.64	36.02
TraesCS1B01G292200.1	Wheat	plasma membrane	42.64	33.2
TraesCS7B01G419500.1	Wheat	mitochondrion, plasma membrane	41.65	31.45
TraesCS3B01G257000.2	Wheat	mitochondrion, plasma membrane	40.15	30.04
GSMUA_Achr5P14930_001	Banana	plasma membrane	53.12	29.1
TraesCS1B01G233800.1	Wheat	plastid	33.92	27.76
TraesCS5B01G092200.1	Wheat	plasma membrane	36.16	27.72
TraesCS3B01G371300.1	Wheat	mitochondrion, plasma membrane, plastid	36.66	27.43
TraesCS2B01G158000.1	Wheat	mitochondrion	35.16	26.7
TraesCS5B01G511500.1	Wheat	mitochondrion	36.41	25.84
TraesCS3B01G173200.1	Wheat	mitochondrion	33.92	25.28

Protein Annotations

Gene3D:1.20.1440.100	Gene3D:3.40.50.1000	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF43	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563
SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G319100	EnsemblPlants:TraesCS2B01G319100.1	SEG:seg

Description

No Description!

Coordinates

chr2B:+:454824032..454825318

Molecular Weight (calculated)

43876.2 Da

IEP (calculated)

8.615

GRAVY (calculated)

0.271

Length

401 amino acids

Sequence
(BLAST)

001: MELESMVETT KMTGSPFPTV EKCSSVDRSG DTVVADLDGT LLCDRSSFPY FAHMAFETGG VLRLLLLLLL APLAGLLYLF VSESAGIQVL IFGSMAGAKV
101: DDVESVARAV LPKFYCSDLH PESWRVFSAC GRRFVLTANP RIMVEAFLKD YIGSDVVLGT ELVVWGRRVT GLVCSPGVLV GDNKADALRQ AFGNAMPEIG
201: LGDSKSDFPF MRLCKERYMV PPTPKMKPVP QENLPKTVIF HDGRIVHRPS PALALLTLLW FPIGLLLSFL RIAAGSLLPM RMVYHAFTAL GVRVTIKGNQ
301: PPPACLESGQ TGVLFVCSHR TLLDPIFLST ALGRPITAVT YSVSRLSEIL SPIRTARLTR DRAVDAAMIR RLLKEGDLVV CPEGTTCREP FLLRSRPCSR
401: S

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.