Factsheet for PGSC0003DMT400028782

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
peroxisome 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400028781	Potato	plasma membrane	93.51	93.32
PGSC0003DMT400028779	Potato	plasma membrane	38.74	85.27
PGSC0003DMT400028775	Potato	plasma membrane	78.7	79.35
PGSC0003DMT400007387	Potato	plasma membrane	76.47	75.1
PGSC0003DMT400003553	Potato	plasma membrane	70.59	72.5
PGSC0003DMT400091384	Potato	plasma membrane	73.02	70.87
PGSC0003DMT400073428	Potato	cytosol	42.19	68.87
EER90914	Sorghum	plasma membrane	67.75	66.14
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	67.34	64.97
TraesCS4A01G248400.1	Wheat	plasma membrane	67.34	64.84
Zm00001d033915_P001	Maize	plasma membrane	67.14	64.77
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	66.33	61.58
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	63.49	61.25
TraesCS4B01G066500.1	Wheat	plasma membrane	67.34	60.92
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	49.49	60.85
TraesCS4D01G280800.1	Wheat	peroxisome	60.04	59.2
TraesCS4B01G282100.1	Wheat	peroxisome	59.84	59.0
TraesCS4A01G021500.1	Wheat	peroxisome	59.63	58.8
Zm00001d032973_P001	Maize	cytosol, peroxisome, plasma membrane	60.85	57.58
TraesCS1A01G139200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	59.63	57.53
TraesCS1B01G149600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	59.43	57.34
EER91628	Sorghum	cytosol	60.24	57.34
TraesCS1D01G132800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	59.23	57.14
HORVU4Hr1G074470.4	Barley	plastid	60.04	56.49
Zm00001d027810_P001	Maize	cytosol, peroxisome, plasma membrane	56.39	54.94
PGSC0003DMT400052335	Potato	cytosol	55.58	54.15
HORVU1Hr1G032150.4	Barley	peroxisome	59.03	53.89
HORVU4Hr1G011110.4	Barley	plastid	67.95	53.69
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	56.59	53.24
Os03t0166600-00	Rice	cytosol	26.57	52.19
TraesCS2A01G015700.1	Wheat	mitochondrion	60.65	51.46
PGSC0003DMT400016230	Potato	golgi, mitochondrion, plasma membrane	41.18	51.26
PGSC0003DMT400000152	Potato	plasma membrane	51.93	51.1
Os10t0413400-00	Rice	plastid	60.04	47.97
PGSC0003DMT400044571	Potato	plasma membrane	48.48	43.93
GSMUA_Achr5P14930_001	Banana	plasma membrane	56.59	38.11
PGSC0003DMT400069796	Potato	plasma membrane	43.81	28.92

Protein Annotations

EntrezGene:102588829	MapMan:26.9.3.2	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016746	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	UniProt:M1ARP4	PFAM:PF01553
PFAM:PF12710	EnsemblPlantsGene:PGSC0003DMG400011080	PGSC:PGSC0003DMG400011080	EnsemblPlants:PGSC0003DMT400028782	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7
InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI0002964AFA
RefSeq:XP_006339011.1	SEG:seg	:	:	:	:

Description

ER glycerol-phosphate acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400011080]

Coordinates

chr10:+:54237508..54239114

Molecular Weight (calculated)

54971.7 Da

IEP (calculated)

9.601

GRAVY (calculated)

0.164

Length

493 amino acids

Sequence
(BLAST)

001: MSITFFPSVE KCTSEGREKD TLVTDLDGTL LRGRSSFAYF ALVAFDVGGV LRLLFLLLAS PLAGILYYFI SESVGIQVLI FVTFVGMKVS DIESAARAVL
101: PKFYSEDLHP ESWRVFSSCG KRCVLTATPK IMVEPFLKDY LGVDIVLGTE IETYKGRATG FVRSPGVLVG KNKANALRRT FGDTQPEIGL GDRDTDIPFV
201: TLCKEGYFVP SNPKVKAVST NKLPKPIIFH DGRLIKKPTP LMSLLIILWI PFGFFLSCLR ACAGLLLPTP LQYYASWAMG VRLIIRGNPP PRIKKSKDQS
301: GVLFVCSHKT LCDAVLLSTV LGRPIPAVAY SLSRFSEIIA PIKTIRLTRE RGSDASIIKQ LLKEGDLTIF PEGTTCREPF LLRFSSLFAE LTNEIVPVAM
401: VNKMSMFHGT TARGWKWMDM FFFLMNPRPT YEITFLNKLS YEYTCKSGKS SHEVANYVQK VIAETLSYEC TIFTRKDKYI ALAGNDGTVM KKS

Best Arabidopsis Sequence Match ( AT1G01610.1 )
(BLAST)

001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME

Arabidopsis Description

GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.