Factsheet for GSMUA_Achr5P14930_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
endoplasmic reticulum 2
plastid 1
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g01210.t01	Wine grape	plasma membrane	45.36	66.0
PGSC0003DMT400073428	Potato	cytosol	26.64	64.57
EER90914	Sorghum	plasma membrane	43.58	63.17
PGSC0003DMT400007387	Potato	plasma membrane	43.31	63.15
Solyc04g005840.1.1	Tomato	plasma membrane	42.76	62.73
TraesCS4A01G248400.1	Wheat	plasma membrane	43.44	62.11
TraesCS4D01G065400.1	Wheat	plasma membrane, plastid	43.31	62.04
Zm00001d033915_P001	Maize	plasma membrane	43.17	61.84
KRH33389	Soybean	plasma membrane	42.76	61.49
Os03t0735900-00	Rice	golgi, peroxisome, plasma membrane	44.26	61.02
KRG90133	Soybean	plasma membrane	42.62	60.94
PGSC0003DMT400003553	Potato	plasma membrane	39.75	60.62
PGSC0003DMT400091384	Potato	plasma membrane	41.67	60.04
Solyc02g087500.1.1	Tomato	plasma membrane	41.67	60.04
HORVU7Hr1G007570.1	Barley	peroxisome, plasma membrane	40.3	57.73
TraesCS4B01G066500.1	Wheat	plasma membrane	42.76	57.43
PGSC0003DMT400028782	Potato	plasma membrane	38.11	56.59
PGSC0003DMT400028781	Potato	plasma membrane	36.07	53.44
TraesCS2B01G319100.1	Wheat	cytosol, peroxisome, plasma membrane	29.1	53.12
VIT_14s0066g02150.t01	Wine grape	golgi, plasma membrane, plastid	36.07	52.91
GSMUA_Achr1P06780_001	Banana	plasma membrane	29.1	51.95
PGSC0003DMT400028775	Potato	plasma membrane	34.7	51.94
PGSC0003DMT400028779	Potato	plasma membrane	15.85	51.79
Solyc10g084900.1.1	Tomato	plasma membrane	34.02	51.23
HORVU4Hr1G011110.4	Barley	plastid	42.62	50.0
TraesCS2A01G015700.1	Wheat	mitochondrion	39.07	49.23
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	29.92	49.1
GSMUA_Achr10P...	Banana	plasma membrane	27.19	45.96
GSMUA_Achr10P...	Banana	plasma membrane	30.19	44.2
GSMUA_Achr6P34050_001	Banana	cytosol, peroxisome, plasma membrane	25.41	43.06
GSMUA_Achr3P23260_001	Banana	golgi, plastid, vacuole	16.94	40.39
GSMUA_Achr2P16430_001	Banana	plasma membrane	23.77	39.01
GSMUA_AchrUn_...	Banana	golgi, plasma membrane	22.27	35.67
GSMUA_Achr8P27070_001	Banana	plastid	26.23	34.85
GSMUA_Achr10P...	Banana	plasma membrane	15.3	34.67
GSMUA_Achr11P...	Banana	mitochondrion	23.5	33.86
GSMUA_Achr3P24330_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane	22.95	32.31
GSMUA_Achr8P06330_001	Banana	mitochondrion	23.09	32.07
GSMUA_Achr7P05580_001	Banana	cytosol	21.17	30.27
GSMUA_Achr3P16480_001	Banana	mitochondrion	19.13	27.5
GSMUA_Achr5P27160_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	19.54	14.82

Protein Annotations

EnsemblPlants:GSMUA_Achr5P14930_001	EnsemblPlants:GSMUA_Achr5T14930_001	EnsemblPlantsGene:GSMUA_Achr5G14930_001	Gene3D:3.40.50.1000	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:HAD_sf	InterPro:IPR023214	PANTHER:PTHR15486	PANTHER:PTHR15486:SF7	SEG:seg
SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI000295B5C7	UniProt:M0SYM2	MapMan:35.1	:

Description

Putative Glycerol-3-phosphate acyltransferase 6 [Source:GMGC_GENE;Acc:GSMUA_Achr5G14930_001]

Coordinates

chr5:+:10835541..10845717

Molecular Weight (calculated)

81455.2 Da

IEP (calculated)

7.776

GRAVY (calculated)

-0.143

Length

732 amino acids

Sequence
(BLAST)

001: MVAFRGETFK TVDQCTSVGR EGHTVVADMD GTLLLGRSSF PYFALVAFEV GGVLRLLLLL LAAPLVGVLY YFLSESAGIK VLIFAALAGA RVEEVEIMVE
101: AFLKEYLGAD LVIGTELGTY KGRLTGFAVH PGVLVGRNKA AALRKQLPEA SPEIGLGDRE TDFPFMSLCQ EAYVVPPKPR CGAVASDKLP KPVVFHDGRL
201: VQKPTPLLAL VTVLWFPAGF LLACLRIASG ALLPMRYVYH VFRALGVRVT VRGTPPPPAS TSLGHSGVLF VCSHRTLLDP VFLSVALGRP IAAVTYSGDL
301: AICPEGTTCR EPFLLRFSAL FAELTDQIVP VATCSRMSMF HGTTARGWKG MDPFYFFMNP SPAYEVTFLD KLPLEITCSG GKSSHEVANY IQRAIASTLS
401: YECTRFTRKD KYRALAGNDG TVPEKKYEDD PTVGHPLYCE IRQVEVKKIK AKGLSFASHI SFQRETVTTN MDEFQEVPVK FSQSRSGTES SLGKKLKFEF
501: LLEIKKNHKK ERLLKKQHRE ALLPGSFVTP DGASSGRFLC DGKPVMYTLL LHRFLMLQSY VICFRKRQCS AVNVVRRSVI GRPDVSTNGK LNGCWQMDLV
601: NNDTRCPKSN YYEEINIKHQ DEPLDHRSIG GGEGLRNIRK KDFVDTVSDI DAGFNSDDDI VGEAVYDEEY LRSQKQQKVS SWPEGDEEFR WKEENVEDDE
701: IEEEHSSSTS EIWRINAITK GFLVELGRKQ KN

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.