Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0166600-00 | Rice | cytosol | 48.66 | 43.43 |
| PGSC0003DMT400028781 | Potato | plasma membrane | 91.07 | 41.3 |
| PGSC0003DMT400028782 | Potato | plasma membrane | 85.27 | 38.74 |
| PGSC0003DMT400028775 | Potato | plasma membrane | 77.23 | 35.38 |
| TraesCS2B01G319100.1 | Wheat | cytosol, peroxisome, plasma membrane | 58.04 | 32.42 |
| PGSC0003DMT400007387 | Potato | plasma membrane | 72.32 | 32.27 |
| PGSC0003DMT400091384 | Potato | plasma membrane | 70.54 | 31.1 |
| PGSC0003DMT400003553 | Potato | plasma membrane | 64.73 | 30.21 |
| TraesCS4A01G248400.1 | Wheat | plasma membrane | 64.73 | 28.32 |
| EER90914 | Sorghum | plasma membrane | 63.84 | 28.32 |
| TraesCS4D01G065400.1 | Wheat | plasma membrane, plastid | 64.29 | 28.18 |
| Zm00001d033915_P001 | Maize | plasma membrane | 63.84 | 27.98 |
| HORVU7Hr1G007570.1 | Barley | peroxisome, plasma membrane | 61.61 | 27.01 |
| Os03t0735900-00 | Rice | golgi, peroxisome, plasma membrane | 63.84 | 26.93 |
| TraesCS4B01G066500.1 | Wheat | plasma membrane | 64.29 | 26.42 |
| TraesCS4D01G280800.1 | Wheat | peroxisome | 55.36 | 24.8 |
| TraesCS4B01G282100.1 | Wheat | peroxisome | 54.91 | 24.6 |
| TraesCS4A01G021500.1 | Wheat | peroxisome | 54.46 | 24.4 |
| EER91628 | Sorghum | cytosol | 55.8 | 24.13 |
| TraesCS1A01G139200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 54.91 | 24.07 |
| TraesCS1B01G149600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 54.91 | 24.07 |
| HORVU4Hr1G074470.4 | Barley | plastid | 56.25 | 24.05 |
| TraesCS1D01G132800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 54.46 | 23.87 |
| PGSC0003DMT400052335 | Potato | cytosol | 53.12 | 23.52 |
| Zm00001d032973_P001 | Maize | cytosol, peroxisome, plasma membrane | 54.46 | 23.42 |
| HORVU4Hr1G011110.4 | Barley | plastid | 65.18 | 23.4 |
| HORVU1Hr1G032150.4 | Barley | peroxisome | 54.91 | 22.78 |
| PGSC0003DMT400000152 | Potato | plasma membrane | 50.89 | 22.75 |
| Zm00001d027810_P001 | Maize | cytosol, peroxisome, plasma membrane | 51.34 | 22.73 |
| KXG40111 | Sorghum | cytosol, peroxisome, plasma membrane | 52.68 | 22.52 |
| TraesCS2A01G015700.1 | Wheat | mitochondrion | 54.02 | 20.83 |
| Os10t0413400-00 | Rice | plastid | 52.68 | 19.12 |
| PGSC0003DMT400044571 | Potato | plasma membrane | 44.2 | 18.2 |
| GSMUA_Achr5P14930_001 | Banana | plasma membrane | 51.79 | 15.85 |
| PGSC0003DMT400016230 | Potato | golgi, mitochondrion, plasma membrane | 21.88 | 12.37 |
| PGSC0003DMT400069796 | Potato | plasma membrane | 37.05 | 11.11 |
| PGSC0003DMT400073428 | Potato | cytosol | 6.7 | 4.97 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400028779 | EnsemblPlantsGene:PGSC0003DMG400011078 | EntrezGene:107061331 | Gene3D:3.40.50.1000 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 | PANTHER:PTHR15486 | PANTHER:PTHR15486:SF7 |
| PFAM:PF12710 | PGSC:PGSC0003DMG400011078 | RefSeq:XP_015165895.1 | SEG:seg | SUPFAM:SSF56784 | TMHMM:TMhelix |
| UniParc:UPI0002953304 | UniProt:M1ARP1 | MapMan:35.1 | : | : | : |
Description
ER glycerol-phosphate acyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400011078]
Coordinates
chr10:+:54250386..54251175
Molecular Weight (calculated)
24839.4 Da
IEP (calculated)
8.452
GRAVY (calculated)
0.227
Length
224 amino acids
Sequence
(BLAST)
(BLAST)
001: MGITIFPTIE KCTSEGRARD TIVANLDGTL LRSKASFAYF ALVAFDVGGV LRLLFLLLVS PFFSILYYFI SESVGLQVII FVTFVGMKVS DIESTARAVL
101: PKFYSEDLHP ESWRVFSSCG KRCVLTSTPR IMVEPFLKDY LGVDIVLGTE IETYKGRATG FVRAPGVLVG KNKANALRRI FGETQPEIGL GDCDTDIPYM
201: SLCKERKDKY MALARNDGTV VKNT
101: PKFYSEDLHP ESWRVFSSCG KRCVLTSTPR IMVEPFLKDY LGVDIVLGTE IETYKGRATG FVRAPGVLVG KNKANALRRI FGETQPEIGL GDCDTDIPYM
201: SLCKERKDKY MALARNDGTV VKNT
001: MSPAKKSRSF PPISECKSRE YDSIAADLDG TLLLSRSSFP YFMLVAIEAG SLFRGLILLL SLPIVIIAYL FVSESLGIQI LIFISFAGIK IKNIELVSRA
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME
101: VLTRFYAADV RKDSFEVFDK CKKRKVVVTA NPIVMVEPFV KDYLGGDKVL GTEIEVNPKT MKATGFVKKP GVLVGDLKRL AILKEFGDDS PDLGLGDRTS
201: DHDFMSICKE GYMVHETKSA TTVPIESLKN RIIFHDGRLV QRPTPLNALI IYLWLPFGFM LSVFRVYFNL PLPERFVRYT YEILGIHLTI RGHRPPPPSP
301: GKPGNLYVLN HRTALDPIII AIALGRKITC VTYSVSRLSL MLSPIPAVAL TRDRVADAAR MRQLLEKGDL VICPEGTTCR EPYLLRFSAL FAELSDRIVP
401: VAMNCKQGMF NGTTVRGVKF WDPYFFFMNP RPSYEATFLD RLPEEMTVNG GGKTPFEVAN YVQKVIGGVL GFECTELTRK DKYLLLGGND GKVESINKTK
501: SME
Arabidopsis Description
GPAT4GPAT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W9F8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.