Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032973_P001 | Maize | cytosol, peroxisome, plasma membrane | 92.47 | 91.94 |
| TraesCS1B01G149600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 80.12 | 81.21 |
| TraesCS1D01G132800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 79.92 | 81.02 |
| TraesCS1A01G139200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 79.92 | 81.02 |
| HORVU1Hr1G032150.4 | Barley | peroxisome | 79.15 | 75.93 |
| KXG40111 | Sorghum | cytosol, peroxisome, plasma membrane | 73.75 | 72.9 |
| PGSC0003DMT400073428 | Potato | cytosol | 42.47 | 72.85 |
| Os10t0413400-00 | Rice | plastid | 85.33 | 71.64 |
| EER90914 | Sorghum | plasma membrane | 68.15 | 69.9 |
| PGSC0003DMT400007387 | Potato | plasma membrane | 65.83 | 67.93 |
| VIT_01s0026g01210.t01 | Wine grape | plasma membrane | 65.64 | 67.59 |
| Solyc04g005840.1.1 | Tomato | plasma membrane | 64.86 | 67.33 |
| PGSC0003DMT400003553 | Potato | plasma membrane | 61.97 | 66.88 |
| KRH33389 | Soybean | plasma membrane | 65.06 | 66.21 |
| Solyc02g087500.1.1 | Tomato | plasma membrane | 64.86 | 66.14 |
| KRG90133 | Soybean | plasma membrane | 65.06 | 65.82 |
| PGSC0003DMT400091384 | Potato | plasma membrane | 63.9 | 65.16 |
| PGSC0003DMT400028782 | Potato | plasma membrane | 57.34 | 60.24 |
| PGSC0003DMT400028781 | Potato | plasma membrane | 56.76 | 59.51 |
| PGSC0003DMT400028779 | Potato | plasma membrane | 24.13 | 55.8 |
| Solyc10g084900.1.1 | Tomato | plasma membrane | 52.12 | 55.56 |
| PGSC0003DMT400028775 | Potato | plasma membrane | 51.74 | 54.81 |
| EES03906 | Sorghum | golgi, peroxisome, plasma membrane | 51.93 | 53.48 |
| EES04353 | Sorghum | plastid | 51.93 | 51.93 |
| VIT_14s0066g02150.t01 | Wine grape | golgi, plasma membrane, plastid | 49.42 | 51.3 |
| KXG22121 | Sorghum | endoplasmic reticulum, golgi, plasma membrane | 48.84 | 49.61 |
| EES18341 | Sorghum | plastid | 48.65 | 48.28 |
| EES01127 | Sorghum | mitochondrion | 43.44 | 39.34 |
| KXG32181 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 40.93 | 38.2 |
| KXG37209 | Sorghum | mitochondrion | 40.93 | 37.26 |
| EES18528 | Sorghum | mitochondrion | 35.71 | 37.22 |
| OQU86769 | Sorghum | mitochondrion | 37.84 | 36.5 |
| KXG23710 | Sorghum | plastid | 41.7 | 35.82 |
| EES08969 | Sorghum | mitochondrion | 39.77 | 35.46 |
Protein Annotations
| Gene3D:1.20.1440.100 | MapMan:26.9.3.2 | Gene3D:3.40.50.1000 | MapMan:5.2.1.2.2 | EntrezGene:8075872 | UniProt:C5WM55 |
| EnsemblPlants:EER91628 | ProteinID:EER91628 | ProteinID:EER91628.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010143 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016311 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016787 | GO:GO:0016791 |
| GO:GO:0090447 | InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 | PFAM:PF01553 | PFAM:PF12710 |
| PANTHER:PTHR15486 | PANTHER:PTHR15486:SF7 | InterPro:Plipid/glycerol_acylTrfase | SMART:SM00563 | EnsemblPlantsGene:SORBI_3001G250200 | SUPFAM:SSF56784 |
| SUPFAM:SSF69593 | unigene:Sbi.20582 | TMHMM:TMhelix | UniParc:UPI0001A8204D | RefSeq:XP_002464630.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr1:+:26998413..27003143
Molecular Weight (calculated)
55839.2 Da
IEP (calculated)
9.114
GRAVY (calculated)
0.269
Length
518 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEAVEAVVA AGVEPFPTVD KCDASGLGAH SSVVADLDGT LLRSRSAFPY YALVAFETGG VPRLLLLLLL SPLAALLRFL ASESACLRVL VFGATAGARV
101: RDVESAARAV LPRFYAADVH PAAWRVFSAC SRRRVVLTAT PRLFAEPFLR DCLGADAVAG TELATWRGRA TGLVDARRGG VLVGRSKAQA LREILAADGG
201: DAPDVGLGDS RSDYPFMSMC KEAYIVPRAP VEPALPMDQL PRPVIFHDGR LVRRPTPLVA LVVVLWFPVG LALACLRIAA GALLPMPLVY YAFWALGVRV
301: VVRGAPPPPR AERATGRRGV LFACSHRTLL DPIFLSTALG RPVAAVTYSL SRLSEFLSPI RTVRLSRDRA TDAAMIRDLL AEGDLVICPE GTTCREPFLL
401: RFSALFAELT SEVVPVAMEN RMSMFHGTTA RGWKGMDPFY FFMNPSPAYV VTFLNKLPPE LTCAGGRTSH EVANYIQRLI AATLSYECTS LTRKDKYRAL
501: AGNDGVVATP KPPPTVAS
101: RDVESAARAV LPRFYAADVH PAAWRVFSAC SRRRVVLTAT PRLFAEPFLR DCLGADAVAG TELATWRGRA TGLVDARRGG VLVGRSKAQA LREILAADGG
201: DAPDVGLGDS RSDYPFMSMC KEAYIVPRAP VEPALPMDQL PRPVIFHDGR LVRRPTPLVA LVVVLWFPVG LALACLRIAA GALLPMPLVY YAFWALGVRV
301: VVRGAPPPPR AERATGRRGV LFACSHRTLL DPIFLSTALG RPVAAVTYSL SRLSEFLSPI RTVRLSRDRA TDAAMIRDLL AEGDLVICPE GTTCREPFLL
401: RFSALFAELT SEVVPVAMEN RMSMFHGTTA RGWKGMDPFY FFMNPSPAYV VTFLNKLPPE LTCAGGRTSH EVANYIQRLI AATLSYECTS LTRKDKYRAL
501: AGNDGVVATP KPPPTVAS
001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T
Arabidopsis Description
GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.