CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

cytosol 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042813_P001	Maize	plastid	89.07	95.12
Os01t0855000-01	Rice	cytosol, peroxisome, plasma membrane	93.24	94.37
HORVU3Hr1G084990.1	Barley	plasma membrane	90.06	91.15
TraesCS3A01G368400.1	Wheat	cytosol, peroxisome, plasma membrane	89.66	90.74
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	89.46	90.54
TraesCS3B01G400000.1	Wheat	golgi	89.46	90.54
VIT_08s0007g02000.t01	Wine grape	golgi	73.76	74.35
KRH49307	Soybean	plasma membrane	72.37	73.39
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	64.81	73.09
KRH75836	Soybean	cytosol, plasma membrane, plastid	70.58	72.15
AT2G38110.1	Thale cress	cytosol, golgi, plasma membrane	71.77	72.06
Bra017137.1-P	Field mustard	cytosol, golgi, peroxisome	70.58	70.86
KRH55439	Soybean	plasma membrane	38.97	70.5
CDY69719	Canola	cytosol, golgi, peroxisome	59.84	70.49
Bra005137.1-P	Field mustard	peroxisome	70.18	70.46
CDY64226	Canola	peroxisome	70.18	70.46
GSMUA_Achr10P...	Banana	plasma membrane	60.64	70.44
PGSC0003DMT400052335	Potato	cytosol	70.78	70.36
CDX74912	Canola	peroxisome	69.98	70.26
KRH66036	Soybean	plasma membrane	69.18	69.88
CDX93327	Canola	golgi, peroxisome, plasma membrane	69.58	69.86
Solyc09g014350.2.1	Tomato	cytosol	69.98	69.84
KRH00171	Soybean	plastid	72.56	67.72
KRG88817	Soybean	plasma membrane	37.57	67.02
KXG22121	Sorghum	endoplasmic reticulum, golgi, plasma membrane	67.2	66.27
GSMUA_Achr10P...	Banana	plasma membrane	65.41	65.8
EER90914	Sorghum	plasma membrane	54.47	54.26
EES04353	Sorghum	plastid	54.27	52.7
EER91628	Sorghum	cytosol	53.48	51.93
KXG40111	Sorghum	cytosol, peroxisome, plasma membrane	51.89	49.81
EES18341	Sorghum	plastid	43.14	41.57
EES01127	Sorghum	mitochondrion	38.57	33.92
KXG32181	Sorghum	endoplasmic reticulum, plasma membrane, plastid	37.38	33.87
EES18528	Sorghum	mitochondrion	32.8	33.2
EES08969	Sorghum	mitochondrion	37.77	32.7
KXG37209	Sorghum	mitochondrion	36.78	32.51
OQU86769	Sorghum	mitochondrion	34.59	32.4
KXG23710	Sorghum	plastid	37.38	31.18

Protein Annotations

MapMan:21.9.1.5.1	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	EntrezGene:8060114	UniProt:C5XQF6	ncoils:Coil
EnsemblPlants:EES03906	ProteinID:EES03906	ProteinID:EES03906.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010143	GO:GO:0016020
GO:GO:0016021	GO:GO:0016311	GO:GO:0016740	GO:GO:0016746	GO:GO:0016787	GO:GO:0016791
GO:GO:0090447	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	PFAM:PF01553	PFAM:PF12710
PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563	EnsemblPlantsGene:SORBI_3003G360700	SUPFAM:SSF56784
SUPFAM:SSF69593	unigene:Sbi.12710	TMHMM:TMhelix	UniParc:UPI0001A85202	RefSeq:XP_002458786.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:67827783..67831882

Molecular Weight (calculated)

56186.0 Da

IEP (calculated)

9.677

GRAVY (calculated)

0.048

Length

503 amino acids

Sequence
(BLAST)

001: MVASYRSRRF KPIEECCSEG RSEQTVAADL DGTLLISRSA FPYYLLVALE AGSVLRAVLL LLSVPFVYVT YIFFSESLAI STLVYISVAG LKVRSIEMVA
101: RSVLPRFYAG DVHPESWRVF NSFGKRYIIT ASPRIMVEPF ARAFLGADKV VGTELEVGKN GKATGFMVKP GVLVGDHKKK AVVKELGDAV PDVGMGDRET
201: DFDFMSICKE AYLVTSRKYS PVGKNQLLSP LILHDGRLVQ RPTPLVALVT FLWMPFGFAL ALMRVYINLP LPERIVYYTY KLMGIRLIVK GNPPPPPKKG
301: HPGVLFVCNH RTVLDPVEVA VALRRKVSCV TYSISKFSEL ISPIKAVALS REREKDAENI RRLLEEGDLV ICPEGTTCRE PFLLRFSALF AELTDRIVPV
401: AINTKESMFH GSTVRGFKLM DPYFFFMNPR PTYEITFLTQ LPKDLTCSGG KSPIEVANYI QKTLSGQLGF ECTTITRKEK YGILAGTDGR VPSKNKDKEK
501: EKN

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.