CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, mitochondrion
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH00171	Soybean	plastid	97.18	89.42
KRH55439	Soybean	plasma membrane	49.6	88.49
KRG88817	Soybean	plasma membrane	48.99	86.17
KRH75836	Soybean	cytosol, plasma membrane, plastid	84.88	85.57
KRH66036	Soybean	plasma membrane	83.67	83.33
VIT_08s0007g02000.t01	Wine grape	golgi	83.67	83.17
AT2G38110.1	Thale cress	cytosol, golgi, plasma membrane	78.63	77.84
PGSC0003DMT400052335	Potato	cytosol	79.03	77.47
CDY64226	Canola	peroxisome	78.23	77.45
Bra017137.1-P	Field mustard	cytosol, golgi, peroxisome	78.23	77.45
CDX74912	Canola	peroxisome	78.02	77.25
Bra005137.1-P	Field mustard	peroxisome	77.82	77.05
Solyc09g014350.2.1	Tomato	cytosol	78.23	76.98
CDX93327	Canola	golgi, peroxisome, plasma membrane	77.62	76.85
CDY69719	Canola	cytosol, golgi, peroxisome	65.93	76.58
Os01t0855000-01	Rice	cytosol, peroxisome, plasma membrane	74.6	74.45
Zm00001d042813_P001	Maize	plastid	69.56	73.25
EES03906	Sorghum	golgi, peroxisome, plasma membrane	73.39	72.37
TraesCS3A01G368400.1	Wheat	cytosol, peroxisome, plasma membrane	71.37	71.23
HORVU3Hr1G084990.1	Barley	plasma membrane	71.17	71.03
GSMUA_Achr3P17610_001	Banana	cytosol, golgi, plasma membrane	63.71	70.85
TraesCS3D01G361300.1	Wheat	golgi, plastid, unclear	70.97	70.83
TraesCS3B01G400000.1	Wheat	golgi	70.97	70.83
GSMUA_Achr10P...	Banana	plasma membrane	60.48	69.28
HORVU1Hr1G073340.2	Barley	plasma membrane	63.31	62.8
GSMUA_Achr10P...	Banana	plasma membrane	62.5	62.0
KRH48117	Soybean	plasma membrane	62.3	61.92
KRH64978	Soybean	plasma membrane	61.49	61.0
Os05t0448300-01	Rice	plasma membrane	59.07	60.29
Zm00001d010078_P001	Maize	plasma membrane	57.86	59.05
TraesCS1B01G287900.1	Wheat	golgi, peroxisome, plasma membrane	60.28	58.28
KXG22121	Sorghum	endoplasmic reticulum, golgi, plasma membrane	59.88	58.24
TraesCS1D01G278000.1	Wheat	plasma membrane, plastid	62.9	56.62
KRH33389	Soybean	plasma membrane	58.06	56.58
TraesCS1A01G278700.1	Wheat	plastid	62.1	56.31
KRG90133	Soybean	plasma membrane	57.46	55.66
KRH73056	Soybean	cytosol, endoplasmic reticulum, plasma membrane	47.78	50.21
KRH15081	Soybean	cytosol	47.58	50.0
KRH73656	Soybean	plasma membrane	47.98	44.16
KRH14479	Soybean	plasma membrane	47.58	43.7
KRG98920	Soybean	mitochondrion	45.97	43.26
KRH46052	Soybean	mitochondrion, plasma membrane	45.56	42.4
KRH16640	Soybean	endoplasmic reticulum, golgi, plasma membrane, plastid	41.33	40.59
KRH18844	Soybean	plasma membrane	40.52	39.96
KRH16642	Soybean	plasma membrane	39.72	39.64
KRH68291	Soybean	mitochondrion	39.72	38.7
KRH68289	Soybean	endoplasmic reticulum, plasma membrane	38.91	35.81
KRG96552	Soybean	plasma membrane	38.51	35.37
KRH69194	Soybean	golgi, plasma membrane, plastid	39.52	35.32
KRH31769	Soybean	golgi	38.51	34.35

Protein Annotations

EntrezGene:100776240	MapMan:21.9.1.5.1	Gene3D:3.40.50.1000	MapMan:5.2.1.2.2	EMBL:ACUP02004353	ncoils:Coil
EnsemblPlantsGene:GLYMA_07G146800	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0010143	GO:GO:0016020	GO:GO:0016021	GO:GO:0016311
GO:GO:0016740	GO:GO:0016746	GO:GO:0016787	GO:GO:0016791	GO:GO:0090447	InterPro:HAD-like_sf
InterPro:HAD_sf	UniProt:I1KKB5	InterPro:IPR023214	EnsemblPlants:KRH49307	ProteinID:KRH49307	ProteinID:KRH49307.1
PFAM:PF01553	PFAM:PF12710	PANTHER:PTHR15486	PANTHER:PTHR15486:SF27	InterPro:Plipid/glycerol_acylTrfase	SMART:SM00563
SUPFAM:SSF56784	SUPFAM:SSF69593	TMHMM:TMhelix	UniParc:UPI0002338EFA	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:17587591..17591371

Molecular Weight (calculated)

55055.7 Da

IEP (calculated)

9.316

GRAVY (calculated)

0.176

Length

496 amino acids

Sequence
(BLAST)

001: MVMGAFRHFE PVSKCSTENR FNQTVASDLD GTLLVSPSAF PYYMLVAIEA GSFLRGLVLL GSVPFVYFTY IFFSETAAIK SLIFIAFAGL KVKDIEMVAS
101: SVLPKFYTED VHPESWRVFN SFGKRYIVTA SPRVMVEPFV KTFLGADKVL GTELEATKSG RFTGFVKEPG VLVGEHKKVA VVKEFQGNLP DLGLGDSKSD
201: YDFMSICKEG YMVPRTKCEP LPRNKLLSPI IFHEGRFVQR PTPLAALLTF LWLPIGIILS ILRVYLNIPL PERIAWYNYK LLGIRVIVKG TPPPPPKKGQ
301: SGVLFVCNHR TVLDPVVTAV ALGRKISCVT YSISKFTEII SPIKAVALSR EREKDAANIK RLLEEGDLVI CPEGTTCREP FLLRFSALFA ELTDRIVPVA
401: INTKQSVFYG TTVCGHKLLD PYFVFMNPMP TYEITFLNQL PKELTCSGGK SAIEVANYIQ RVLAGTLGFE CTNLTRKSKY AMLAGTDGTV PSKEKA

Best Arabidopsis Sequence Match ( AT2G38110.1 )
(BLAST)

001: MGAQEKRRRF EQISKCDVKD RSNHTVAADL DGTLLISRSA FPYYFLVALE AGSLLRALIL LVSVPFVYLT YLTISETLAI NVFVFITFAG LKIRDVELVV
101: RSVLPRFYAE DVRPDTWRIF NTFGKRYIIT ASPRIMVEPF VKTFLGVDKV LGTELEVSKS GRATGFTRKP GILVGQYKRD VVLREFGGLA SDLPDLGLGD
201: SKTDHDFMSI CKEGYMVPRT KCEPLPRNKL LSPIIFHEGR LVQRPTPLVA LLTFLWLPVG FVLSIIRVYT NIPLPERIAR YNYKLTGIKL VVNGHPPPPP
301: KPGQPGHLLV CNHRTVLDPV VTAVALGRKI SCVTYSISKF SELISPIKAV ALTRQREKDA ANIKRLLEEG DLVICPEGTT CREPFLLRFS ALFAELTDRI
401: VPVAINTKQS MFNGTTTRGY KLLDPYFAFM NPRPTYEITF LKQIPAELTC KGGKSPIEVA NYIQRVLGGT LGFECTNFTR KDKYAMLAGT DGRVPVKKEK
501: T

Arabidopsis Description

GPAT6Glycerol-3-phosphate 2-O-acyltransferase 6 [Source:UniProtKB/Swiss-Prot;Acc:O80437]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.